RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ZBTB8OSQ8IWT0 167 aa19.6■□□□□ 0.73
DDX56-207ENST00000448192 IGSF22Q8N9C0 903 aa19.6■□□□□ 0.73
DDX56-207ENST00000448192 TMEM87AQ8NBN3 555 aa19.6■□□□□ 0.73
DDX56-207ENST00000448192 SNX29Q8TEQ0 813 aa19.6■□□□□ 0.73
DDX56-207ENST00000448192 AUTS2Q8WXX7 1259 aa19.6■□□□□ 0.73
DDX56-207ENST00000448192 BHMT2Q9H2M3 363 aa19.6■□□□□ 0.73
DDX56-207ENST00000448192 SMC3Q9UQE7 1217 aa19.6■□□□□ 0.73
DDX56-207ENST00000448192 USP15Q9Y4E8 981 aaPredicted RBP19.6■□□□□ 0.73
DDX56-207ENST00000448192 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.59■□□□□ 0.73
DDX56-207ENST00000448192 ARL5CA6NH57 179 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 LAD1O00515 517 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 NPTXRO95502 500 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 ALDH2P05091 517 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 MLH1P40692 756 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 KCNC3Q14003 757 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 SLC27A1Q6PCB7 646 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 TMEM184AQ6ZMB5 413 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 HACE1Q8IYU2 909 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 BSNDQ8WZ55 320 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 GAD1Q99259 594 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 APOL5Q9BWW9 433 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 ZBP1Q9H171 429 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 NXF3Q9H4D5 531 aaKnown RBP19.59■□□□□ 0.73
DDX56-207ENST00000448192 POLD4Q9HCU8 107 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.59■□□□□ 0.73
DDX56-207ENST00000448192 DDX19AQ9NUU7 478 aaKnown RBP19.59■□□□□ 0.73
DDX56-207ENST00000448192 PRMT7Q9NVM4 692 aaPredicted RBP19.59■□□□□ 0.73
DDX56-207ENST00000448192 FAN1Q9Y2M0 1017 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 STK24Q9Y6E0 443 aa19.59■□□□□ 0.73
DDX56-207ENST00000448192 FAM86C2PA6NEL3 165 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 PP2D1A8MPX8 630 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 LIG1P18858 919 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 IL17AQ16552 155 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 TMEM132AQ24JP5 1023 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 RILPL1Q5EBL4 403 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 TMEM31Q5JXX7 168 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 KRT79Q5XKE5 535 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 CDCA2Q69YH5 1023 aaPredicted RBP19.58■□□□□ 0.72
DDX56-207ENST00000448192 ANKRD54Q6NXT1 300 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 DTHD1Q6ZMT9 781 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 ZFP42Q96MM3 310 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 TMEM175Q9BSA9 504 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 C2orf40Q9H1Z8 148 aa19.58■□□□□ 0.72
DDX56-207ENST00000448192 A0A1B0GUA9 196 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 NRP1O14786 923 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 CLASP2O75122 1294 aaKnown RBP19.57■□□□□ 0.72
DDX56-207ENST00000448192 CTSAP10619 480 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 ALADP13716 330 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 AKAP5P24588 427 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 CDC25AP30304 524 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 PRPHP41219 470 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 SCNN1GP51170 649 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 PPP2R5AQ15172 486 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 DEPTORQ8TB45 409 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 CASP10Q92851 521 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 PRIMPOLQ96LW4 560 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 LRFN3Q9BTN0 628 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 VN1R3Q9BXE9 311 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 FZD8Q9H461 694 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 GIT1Q9Y2X7 761 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 PRG3Q9Y2Y8 225 aaPredicted RBP19.57■□□□□ 0.72
DDX56-207ENST00000448192 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.57■□□□□ 0.72
DDX56-207ENST00000448192 HCFC2Q9Y5Z7 792 aa19.57■□□□□ 0.72
DDX56-207ENST00000448192 E9PMD0 336 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 SSBP05455 408 aaKnown RBP eCLIP19.56■□□□□ 0.72
DDX56-207ENST00000448192 NAMPTP43490 491 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 OR1G1P47890 313 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 PRPF4BQ13523 1007 aaKnown RBP19.56■□□□□ 0.72
DDX56-207ENST00000448192 MAPK6Q16659 721 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 PPP4R3CPQ6ZMV5 832 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 IFT74Q96LB3 600 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 MIOSQ9NXC5 875 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 KLK14Q9P0G3 267 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 PARP2Q9UGN5 583 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 RAPGEFL1Q9UHV5 662 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 DNM3Q9UQ16 869 aa19.56■□□□□ 0.72
DDX56-207ENST00000448192 TTLL13PA6NNM8 815 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 INPPL1O15357 1258 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 DCXO43602 365 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 PRKCBP05771 671 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 HOXB8P17481 243 aaPredicted RBP19.55■□□□□ 0.72
DDX56-207ENST00000448192 GIT2Q14161 759 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 ZRSR1Q15695 479 aaKnown RBP19.55■□□□□ 0.72
DDX56-207ENST00000448192 FAM187BQ17R55 369 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 LARP1BQ659C4 914 aaKnown RBP19.55■□□□□ 0.72
DDX56-207ENST00000448192 SYCE2Q6PIF2 218 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 RNF135Q8IUD6 432 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 COLGALT2Q8IYK4 626 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 KIFAP3Q92845 792 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 KIFC3Q9BVG8 833 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 S1PR5Q9H228 398 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 C11orf16Q9NQ32 467 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 USP20Q9Y2K6 914 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 IRAK3Q9Y616 596 aa19.55■□□□□ 0.72
DDX56-207ENST00000448192 N4BP3O15049 544 aa19.54■□□□□ 0.72
DDX56-207ENST00000448192 GPR37L1O60883 481 aa19.54■□□□□ 0.72
DDX56-207ENST00000448192 NR1I2O75469 434 aa19.54■□□□□ 0.72
DDX56-207ENST00000448192 ATP2C1P98194 919 aaPredicted RBP19.54■□□□□ 0.72
DDX56-207ENST00000448192 PTPN14Q15678 1187 aa19.54■□□□□ 0.72
DDX56-207ENST00000448192 TPRNQ4KMQ1 711 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms