RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 TMEM119Q4V9L6 283 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 GRAMD1AQ96CP6 724 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 PACSIN1Q9BY11 444 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 SESN3P58005 492 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 FAM47EQ6ZV65 393 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 CREG2Q8IUH2 290 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 TTLL6Q8N841 843 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 N4BP2L2Q92802 583 aaPredicted RBP17.76■□□□□ 0.43
TCOF1-206ENST00000445265 RNF25Q96BH1 459 aaPredicted RBP17.76■□□□□ 0.43
TCOF1-206ENST00000445265 GABBR1Q9UBS5 961 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 IP6K2Q9UHH9 426 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 PCDHA10Q9Y5I2 948 aa17.76■□□□□ 0.43
TCOF1-206ENST00000445265 A0A0U1RQJ8 604 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 SMIM22K7EJ46 135 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 ITIH2P19823 946 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 PSMA2P25787 234 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 SNRPFP62306 86 aaKnown RBP17.75■□□□□ 0.43
TCOF1-206ENST00000445265 PDZD4Q76G19 769 aaPredicted RBP17.75■□□□□ 0.43
TCOF1-206ENST00000445265 ZBTB33Q86T24 672 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 PASD1Q8IV76 773 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 C3orf20Q8ND61 904 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 AGPAT3Q9NRZ7 376 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 A0A0A6YYK5 440 aaPredicted RBP17.75■□□□□ 0.43
TCOF1-206ENST00000445265 CHN1P15882 459 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 STAT4Q14765 748 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 PROCA1Q8NCQ7 364 aaPredicted RBP17.75■□□□□ 0.43
TCOF1-206ENST00000445265 GTPBP10A4D1E9 387 aaKnown RBP17.75■□□□□ 0.43
TCOF1-206ENST00000445265 CLDN3O15551 220 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 C21orf2O43822 256 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 FGRP09769 529 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 FBXW10Q5XX13 1052 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 AENQ8WTP8 325 aaKnown RBP17.75■□□□□ 0.43
TCOF1-206ENST00000445265 SEC16BQ96JE7 1060 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 TGS1Q96RS0 853 aaKnown RBP17.75■□□□□ 0.43
TCOF1-206ENST00000445265 STRIP2Q9ULQ0 834 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 GLI1P08151 1106 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 GNA15P30679 374 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 SREBF1P36956 1147 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 IZUMO3Q5VZ72 239 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 GJB7Q6PEY0 223 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 RNF146Q9NTX7 359 aa17.75■□□□□ 0.43
TCOF1-206ENST00000445265 CPP00450 1065 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 COMTP21964 271 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 CIAPIN1Q6FI81 312 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 WDR59Q6PJI9 974 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 TNFRSF25Q93038 417 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 RUSC1Q9BVN2 902 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 TRAIPQ9BWF2 469 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 CPSF2Q9P2I0 782 aaKnown RBP17.74■□□□□ 0.43
TCOF1-206ENST00000445265 SIK3Q9Y2K2 1263 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 IL1R1P14778 569 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 ZNF571Q7Z3V5 609 aaPredicted RBP17.74■□□□□ 0.43
TCOF1-206ENST00000445265 MLXIPLQ9NP71 852 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 VEGFAP15692 232 aaPredicted RBP17.74■□□□□ 0.43
TCOF1-206ENST00000445265 MUTP22033 750 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 LRRC14Q15048 493 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 GJD4Q96KN9 370 aaPredicted RBP17.74■□□□□ 0.43
TCOF1-206ENST00000445265 FAM129AQ9BZQ8 928 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 ROPN1BQ9BZX4 212 aaPredicted RBP17.74■□□□□ 0.43
TCOF1-206ENST00000445265 ROPN1Q9HAT0 212 aaPredicted RBP17.74■□□□□ 0.43
TCOF1-206ENST00000445265 PPP2R5DQ14738 602 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 IL17AQ16552 155 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 ZNF449Q6P9G9 518 aa17.74■□□□□ 0.43
TCOF1-206ENST00000445265 PHF20L1A8MW92 1017 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 KIAA0391O15091 583 aaKnown RBP17.73■□□□□ 0.43
TCOF1-206ENST00000445265 PRPSAP2O60256 369 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 PSMC4P43686 418 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 SNRNP35Q16560 246 aaKnown RBP17.73■□□□□ 0.43
TCOF1-206ENST00000445265 CCDC125Q86Z20 511 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 MYCBPAPQ8TBZ2 947 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 CDH16O75309 829 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 GARSP41250 739 aaKnown RBP17.73■□□□□ 0.43
TCOF1-206ENST00000445265 EHD4Q9H223 541 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 GINM1Q9NU53 330 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 RSPH10B2B2RC85 870 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 CES2O00748 559 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 AKAP3O75969 853 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 RSPH10BP0C881 870 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 PDE1BQ01064 536 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 TAF11Q15544 211 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 KLHL38Q2WGJ6 581 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 SWSAP1Q6NVH7 229 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 PDCD7Q8N8D1 485 aaKnown RBP17.73■□□□□ 0.43
TCOF1-206ENST00000445265 FAM163AQ96GL9 167 aaPredicted RBP17.73■□□□□ 0.43
TCOF1-206ENST00000445265 GBP5Q96PP8 586 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 MTMR9Q96QG7 549 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 SENP1Q9P0U3 644 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 TRAF3IP3Q9Y228 551 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 NID2Q14112 1375 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 SCARA5Q6ZMJ2 495 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 HSD3B7Q9H2F3 369 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 PABPC3Q9H361 631 aaKnown RBP17.73■□□□□ 0.43
TCOF1-206ENST00000445265 VCPKMTQ9H867 229 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 TMBIM4Q9HC24 238 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 POLLQ9UGP5 575 aa17.73■□□□□ 0.43
TCOF1-206ENST00000445265 WDR91A4D1P6 747 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 CASP4P49662 377 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 ACTN3Q08043 901 aaPredicted RBP17.72■□□□□ 0.43
TCOF1-206ENST00000445265 MAPK7Q13164 816 aa17.72■□□□□ 0.43
TCOF1-206ENST00000445265 Q4G0T1 1027 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms