RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 BLVRAP53004 296 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 PRPF39Q86UA1 669 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 RBM12BQ8IXT5 1001 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 PGM2Q96G03 612 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 NT5C1BQ96P26 610 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 FOXP3Q9BZS1 431 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 HERC5Q9UII4 1024 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 KIAA1024Q9UPX6 916 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 WDR19Q8NEZ3 1342 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 PPIP5K2O43314 1243 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 WFS1O76024 890 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 DLGAP3O95886 979 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 OATP04181 439 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 ANXA13P27216 316 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 ITGA9Q13797 1035 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 HP1BP3Q5SSJ5 553 aaPredicted RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 RAPH1Q70E73 1250 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 MREGQ8N565 214 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 EIF1ADQ8N9N8 165 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 GIPC3Q8TF64 312 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 HDAC11Q96DB2 347 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 RBM15Q96T37 977 aaKnown RBP eCLIP10.93□□□□□ -0.66
LIN54-202ENST00000442461 BTBD10Q9BSF8 475 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 PHACTR1Q9C0D0 580 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 SMYD2Q9NRG4 433 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 ATP8A2Q9NTI2 1148 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 TLK1Q9UKI8 766 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 ABCC1P33527 1531 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 DUOX2Q9NRD8 1548 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 PDS5AQ29RF7 1337 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 ESYT2A0FGR8 921 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 GOLGA8RI6L899 631 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 LGR5O75473 907 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 KRT16P08779 473 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 OTUD4Q01804 1114 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 KRR1Q13601 381 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 SPATA5Q8NB90 893 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 C1orf54Q8WWF1 131 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 LPIN2Q92539 896 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 DGCR14Q96DF8 476 aaKnown RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 HEMGNQ9BXL5 484 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 MANSC1Q9H8J5 431 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 RRN3Q9NYV6 651 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 TMOD4Q9NZQ9 345 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 PSMC3IPQ9P2W1 217 aaPredicted RBP10.93□□□□□ -0.66
LIN54-202ENST00000442461 MBD5Q9P267 1494 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 ADGRA3Q8IWK6 1321 aa10.93□□□□□ -0.66
LIN54-202ENST00000442461 TBKBP1A7MCY6 615 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 IRS4O14654 1257 aaPredicted RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 TJP3O95049 919 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 PSMG1O95456 288 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 ATF3P18847 181 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 POLR2BP30876 1174 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 GALK1P51570 392 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 VCPP55072 806 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 FLOT2Q14254 428 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 TMEM63BQ5T3F8 832 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 ANKRD40Q6AI12 368 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 PPM1NQ8N819 430 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 PNMA1Q8ND90 353 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 ATL2Q8NHH9 583 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 DCUN1D5Q9BTE7 237 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 GPCPD1Q9NPB8 672 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 DNAJC12Q9UKB3 198 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 PRELID1Q9Y255 219 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 MATN2O00339 956 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 DNM1LO00429 736 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 STAM2O75886 525 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 COPB2P35606 906 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 EXOSC10Q01780 885 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 OCRLQ01968 901 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 MPP3Q13368 585 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 FAM47AQ5JRC9 791 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 PLD3Q8IV08 490 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 ZNF786Q8N393 782 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 METTL13Q8N6R0 699 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 NFATC2IPQ8NCF5 419 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 ZFAND2BQ8WV99 257 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 ERGIC2Q96RQ1 377 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 DDX50Q9BQ39 737 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 RIOK1Q9BRS2 568 aaKnown RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 MXD3Q9BW11 206 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 OSBPL7Q9BZF2 842 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 IL25Q9H293 177 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 ADNPQ9H2P0 1102 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 UBE2TQ9NPD8 197 aaPredicted RBP10.92□□□□□ -0.66
LIN54-202ENST00000442461 GDF3Q9NR23 364 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 ASNA1O43681 348 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 PIK3CAP42336 1068 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 NCALDP61601 193 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 LIN52Q52LA3 116 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 KRT39Q6A163 491 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 TMPRSS6Q8IU80 811 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 CREG2Q8IUH2 290 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 FBXO25Q8TCJ0 367 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 SLC13A1Q9BZW2 595 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 SAR1AQ9NR31 198 aa10.92□□□□□ -0.66
LIN54-202ENST00000442461 MED14O60244 1454 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms