RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 EFNA5P52803 228 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 ADKP55263 362 aaKnown RBP8.8□□□□□ -1
CCDC39-201ENST00000442201 LAMTOR4Q0VGL1 99 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 KCNH2Q12809 1159 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 PPFIA1Q13136 1202 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 MKRN4PQ13434 485 aaPredicted RBP8.8□□□□□ -1
CCDC39-201ENST00000442201 DCAF17Q5H9S7 520 aaPredicted RBP8.8□□□□□ -1
CCDC39-201ENST00000442201 IQCDQ96DY2 449 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 FAM212AQ96EL1 285 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 TMEM134Q9H6X4 195 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 HSPBP1Q9NZL4 362 aa8.8□□□□□ -1
CCDC39-201ENST00000442201 ANKRD63C9JTQ0 380 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 ASAP2O43150 1006 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 MFAP3LO75121 409 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 DUSP11O75319 330 aaKnown RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 F2P00734 622 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 AFPP02771 609 aaKnown RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 CYBAP13498 195 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 KRT13P13646 458 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 TMOD1P28289 359 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 LIG4P49917 911 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 CLCN3P51790 818 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 CCZ1BP86790 482 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 CCZ1P86791 482 aaPredicted RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 GOLGA8FQ08AF8 430 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 GOLGA8DPQ0D2H9 430 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 TFDP1Q14186 410 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 TAS1R3Q7RTX0 852 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 ZBTB8OSQ8IWT0 167 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 RNF149Q8NC42 400 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 CCDC51Q96ER9 411 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 FAXDC2Q96IV6 333 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 SRGAP2CP0DJJ0 459 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 FXR1P51114 621 aaKnown RBP eCLIP8.79□□□□□ -1
CCDC39-201ENST00000442201 HTRA3P83110 453 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 NAA30Q147X3 362 aaPredicted RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 GRIK4Q16099 956 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 FIGNQ5HY92 759 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 RHPN2Q8IUC4 686 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 PIAS4Q8N2W9 510 aaPredicted RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 RDH13Q8NBN7 331 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 TRPV1Q8NER1 839 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 PPM1EQ8WY54 764 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 POMGNT1Q8WZA1 660 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 TATDN2Q93075 761 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 SLC35C1Q96A29 364 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 C2orf40Q9H1Z8 148 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 MMRN2Q9H8L6 949 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 SRRDQ9UH36 339 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 LUC7L2Q9Y383 392 aaKnown RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 PHLPP2Q6ZVD8 1323 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 DOCK3Q8IZD9 2030 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 RRN3P2A6NIE6 340 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 GPR25O00155 361 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 GARTP22102 1010 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 ADSSP30520 456 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 KRT9P35527 623 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 CHMP4BP1P59074 171 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 IRX1P78414 480 aaPredicted RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 FSCN1Q16658 493 aaKnown RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 INTS8Q75QN2 995 aaKnown RBP8.79□□□□□ -1
CCDC39-201ENST00000442201 CD99L2Q8TCZ2 262 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 PANX2Q96RD6 677 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 SPC25Q9HBM1 224 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 SIK3Q9Y2K2 1263 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 ARID2Q68CP9 1835 aa8.79□□□□□ -1
CCDC39-201ENST00000442201 TTC26A0AVF1 554 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 MAPK13O15264 365 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 PIGRP01833 764 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 MYL3P08590 195 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 CAP1Q01518 475 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 BFSP1Q12934 665 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 MAPK6Q16659 721 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 KIAA0753Q2KHM9 967 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 SLC39A4Q6P5W5 647 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 MTHFD1LQ6UB35 978 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 CCDC155Q8N6L0 562 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 ZBTB10Q96DT7 871 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 ERO1AQ96HE7 468 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 NLRP4Q96MN2 994 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 BAG1Q99933 345 aaPredicted RBP8.78□□□□□ -1
CCDC39-201ENST00000442201 FAM207AQ9NSI2 230 aaPredicted RBP8.78□□□□□ -1
CCDC39-201ENST00000442201 CAPN11Q9UMQ6 739 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 SEPT4O43236 478 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 ZRANB2O95218 330 aaKnown RBP eCLIP8.78□□□□□ -1
CCDC39-201ENST00000442201 C6orf222P0C671 652 aaPredicted RBP8.78□□□□□ -1
CCDC39-201ENST00000442201 KLK7P49862 253 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 BEX3Q00994 111 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 MFSD10Q14728 455 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 ARHGEF6Q15052 776 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 TSR1Q2NL82 804 aaKnown RBP8.78□□□□□ -1
CCDC39-201ENST00000442201 CDCA2Q69YH5 1023 aaPredicted RBP8.78□□□□□ -1
CCDC39-201ENST00000442201 SLFN12LQ6IEE8 588 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 KAT2BQ92831 832 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 KATNAL1Q9BW62 490 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 AKT3Q9Y243 479 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 WDR81Q562E7 1941 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 NRCAMQ92823 1304 aa8.78□□□□□ -1
CCDC39-201ENST00000442201 KIAA0391O15091 583 aaKnown RBP8.78□□□□□ -1
CCDC39-201ENST00000442201 ATP8B1O43520 1251 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms