RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 REM2Q8IYK8 340 aaPredicted RBP9.23□□□□□ -0.93
HPS4-206ENST00000439453 TBCKQ8TEA7 893 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 RNF25Q96BH1 459 aaPredicted RBP9.23□□□□□ -0.93
HPS4-206ENST00000439453 LRRC27Q9C0I9 530 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 EMILIN3Q9NT22 766 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 BZW2Q9Y6E2 419 aaKnown RBP9.23□□□□□ -0.93
HPS4-206ENST00000439453 SMCO2A6NFE2 343 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 SPDYE3A6NKU9 549 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 SNX3O60493 162 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 FGGP02679 453 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 ASNSP08243 561 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 ACTN1P12814 892 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 IFNAR2P48551 515 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
HPS4-206ENST00000439453 SNAPC2Q13487 334 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 ABCB5Q2M3G0 1257 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 DUPD1Q68J44 220 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 KCNK18Q7Z418 384 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 SYCE1Q8N0S2 351 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 SPICE1Q8N0Z3 855 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 ZNF280CQ8ND82 737 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 PLCD4Q9BRC7 762 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 C6orf50Q9HD87 102 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 HOMER3Q9NSC5 361 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 GGT7Q9UJ14 662 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 NR2E1Q9Y466 385 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 LIN7AO14910 233 aaPredicted RBP9.23□□□□□ -0.93
HPS4-206ENST00000439453 AGTP01019 485 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 ZNF131P52739 623 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 SREBF2Q12772 1141 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 CALCRLQ16602 461 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 GALNTL6Q49A17 601 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 FAM26FQ5R3K3 315 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 ERICH1Q86X53 443 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 HES6Q96HZ4 224 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 MTMR9Q96QG7 549 aa9.23□□□□□ -0.93
HPS4-206ENST00000439453 A8MUI8 341 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 OAS1P00973 400 aaKnown RBP9.22□□□□□ -0.93
HPS4-206ENST00000439453 H2AFZP0C0S5 128 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.93
HPS4-206ENST00000439453 DR1Q01658 176 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 KLRC3Q07444 240 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 KCNH2Q12809 1159 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 CRHR2Q13324 411 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 MTMR2Q13614 643 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 BLMHQ13867 455 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 C6orf118Q5T5N4 469 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 H2AFVQ71UI9 128 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 NELFCDQ8IXH7 590 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 RNF217Q8TC41 542 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 SNX29Q8TEQ0 813 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 KLHL29Q96CT2 875 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 NUDT12Q9BQG2 462 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 ERP44Q9BS26 406 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 PICK1Q9NRD5 415 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 TBC1D7Q9P0N9 293 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 TTC7AQ9ULT0 858 aaPredicted RBP9.22□□□□□ -0.93
HPS4-206ENST00000439453 ZNFX1Q9P2E3 1918 aaKnown RBP9.22□□□□□ -0.93
HPS4-206ENST00000439453 A0A0A6YYK5 440 aaPredicted RBP9.22□□□□□ -0.93
HPS4-206ENST00000439453 GOLGA6L10A0A0M3HER8 536 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 POTEMA6NI47 508 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 ENO4A6NNW6 628 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 FLOT1O75955 427 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 KRT16P08779 473 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 GNA11P29992 359 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 PDE6CP51160 858 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 PLTPP55058 493 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 PTENP60484 403 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 COPS2P61201 443 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 ADCY2Q08462 1091 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 SPP2Q13103 211 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 ORC2Q13416 577 aaPredicted RBP9.22□□□□□ -0.93
HPS4-206ENST00000439453 SLC29A2Q14542 456 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 AP1ARQ63HQ0 302 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 ANKRD23Q86SG2 305 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 KIF2BQ8N4N8 673 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 DNAJC19Q96DA6 116 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 C12orf42Q96LP6 360 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 AMFRQ9UKV5 643 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 DAAM1Q9Y4D1 1078 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 USP15Q9Y4E8 981 aaPredicted RBP9.22□□□□□ -0.93
HPS4-206ENST00000439453 PALM3A6NDB9 673 aaPredicted RBP9.22□□□□□ -0.93
HPS4-206ENST00000439453 TRPA1O75762 1119 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 GOLGA8HP0CJ92 632 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 CETPP11597 493 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 BACE1P56817 501 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 BNIP1Q12981 228 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 FGFBP2Q9BYJ0 223 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 CPVLQ9H3G5 476 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 BIN2Q9UBW5 565 aaPredicted RBP9.22□□□□□ -0.93
HPS4-206ENST00000439453 NENFQ9UMX5 172 aa9.22□□□□□ -0.93
HPS4-206ENST00000439453 ZNF236Q9UL36 1845 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 KLHL33A6NCF5 533 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 SLC9A1P19634 815 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 CTGFP29279 349 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 CNGA2Q16280 664 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 TMEM119Q4V9L6 283 aa9.21□□□□□ -0.93
HPS4-206ENST00000439453 KRT79Q5XKE5 535 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms