RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 GJB6O95452 261 aa22.86■■□□□ 1.25
USP48-205ENST00000421625 SEL1L2Q5TEA6 688 aa22.86■■□□□ 1.25
USP48-205ENST00000421625 C11orf63Q6NUN7 778 aa22.86■■□□□ 1.25
USP48-205ENST00000421625 ASRGL1Q7L266 308 aa22.86■■□□□ 1.25
USP48-205ENST00000421625 ARHGEF10LQ9HCE6 1279 aa22.86■■□□□ 1.25
USP48-205ENST00000421625 RGL1Q9NZL6 768 aa22.86■■□□□ 1.25
USP48-205ENST00000421625 ATMINO43313 823 aaPredicted RBP22.85■■□□□ 1.25
USP48-205ENST00000421625 SLURP2P0DP57 97 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 GRIK3Q13003 919 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 GBP7Q8N8V2 638 aaPredicted RBP22.85■■□□□ 1.25
USP48-205ENST00000421625 AAASQ9NRG9 546 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 MGAT5Q09328 741 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 KIF22Q14807 665 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 ZNF568Q3ZCX4 644 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 MFSD14BQ5SR56 506 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 CGB2Q6NT52 195 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 KCNV2Q8TDN2 545 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 MICAL1Q8TDZ2 1067 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 PIGOQ8TEQ8 1089 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 LENG9Q96B70 501 aa22.85■■□□□ 1.25
USP48-205ENST00000421625 ROPN1BQ9BZX4 212 aaPredicted RBP22.85■■□□□ 1.25
USP48-205ENST00000421625 ROPN1Q9HAT0 212 aaPredicted RBP22.85■■□□□ 1.25
USP48-205ENST00000421625 DNAJC17Q9NVM6 304 aaKnown RBP22.85■■□□□ 1.25
USP48-205ENST00000421625 FAM86B1E9PN63 330 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 SMNDC1O75940 238 aaKnown RBP eCLIP22.84■■□□□ 1.25
USP48-205ENST00000421625 FAM86B2P0C5J1 330 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 RRP1BQ14684 758 aaKnown RBP22.84■■□□□ 1.25
USP48-205ENST00000421625 BTBD6Q96KE9 485 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 RUNDC3BQ96NL0 473 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 RXFP1Q9HBX9 757 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 PRKAG3Q9UGI9 489 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 TRPC5Q9UL62 973 aaPredicted RBP22.84■■□□□ 1.25
USP48-205ENST00000421625 MEIS2O14770 477 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 MYL7Q01449 175 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 ANKRD20A2Q5SQ80 823 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 ANKRD20A1Q5TYW2 823 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 ANKRD20A3Q5VUR7 823 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 SLC30A10Q6XR72 485 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 MYCT1Q8N699 235 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 ANKLE1Q8NAG6 615 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 CKAP2Q8WWK9 683 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 TAOK3Q9H2K8 898 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 RABGAP1Q9Y3P9 1069 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 TNRC6CQ9HCJ0 1690 aaKnown RBP22.84■■□□□ 1.25
USP48-205ENST00000421625 PASKQ96RG2 1323 aa22.84■■□□□ 1.25
USP48-205ENST00000421625 EIF4E1BA6NMX2 242 aaKnown RBP22.83■■□□□ 1.25
USP48-205ENST00000421625 TP73O15350 636 aa22.83■■□□□ 1.25
USP48-205ENST00000421625 CHKAP35790 457 aa22.83■■□□□ 1.25
USP48-205ENST00000421625 HADHBP55084 474 aaKnown RBP22.83■■□□□ 1.25
USP48-205ENST00000421625 SIX1Q15475 284 aaPredicted RBP22.83■■□□□ 1.25
USP48-205ENST00000421625 GPATCH4Q5T3I0 446 aaKnown RBP22.83■■□□□ 1.25
USP48-205ENST00000421625 RINT1Q6NUQ1 792 aa22.83■■□□□ 1.25
USP48-205ENST00000421625 SEPT14Q6ZU15 432 aa22.83■■□□□ 1.25
USP48-205ENST00000421625 CNKSR1Q969H4 720 aa22.83■■□□□ 1.25
USP48-205ENST00000421625 IFT74Q96LB3 600 aa22.83■■□□□ 1.25
USP48-205ENST00000421625 PEX19P40855 299 aa22.83■■□□□ 1.24
USP48-205ENST00000421625 ADCY1Q08828 1119 aa22.83■■□□□ 1.24
USP48-205ENST00000421625 TRAPPC3LQ5T215 181 aa22.83■■□□□ 1.24
USP48-205ENST00000421625 SLC13A5Q86YT5 568 aaPredicted RBP22.83■■□□□ 1.24
USP48-205ENST00000421625 OLFML3Q9NRN5 406 aa22.83■■□□□ 1.24
USP48-205ENST00000421625 O00370 1275 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 EML1O00423 815 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 MPHOSPH10O00566 681 aaKnown RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 ATP2A2P16615 1042 aaKnown RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 SNAP25P60880 206 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 TNIP1Q15025 636 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 CYP1B1Q16678 543 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 CDCA2Q69YH5 1023 aaPredicted RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 CAPRIN2Q6IMN6 1127 aaKnown RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 TRMT10CQ7L0Y3 403 aaKnown RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 CYFIP1Q7L576 1253 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 MAEAQ7L5Y9 396 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 RDH13Q8NBN7 331 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 CRYGNQ8WXF5 182 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 TGS1Q96RS0 853 aaKnown RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 FAM167BQ9BTA0 163 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 KIF9Q9HAQ2 790 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 FAM13AO94988 1023 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 GPSM2P81274 684 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 LACTBP83111 547 aaPredicted RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 GRAPQ13588 217 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 GRAPLQ8TC17 118 aaPredicted RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 SERPINB12Q96P63 405 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 DDX4Q9NQI0 724 aaKnown RBP22.82■■□□□ 1.24
USP48-205ENST00000421625 THSD7AQ9UPZ6 1657 aa22.82■■□□□ 1.24
USP48-205ENST00000421625 ZBTB39O15060 712 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 TAL1P17542 331 aaPredicted RBP22.81■■□□□ 1.24
USP48-205ENST00000421625 CALCOCO2Q13137 446 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 MIS18BP1Q6P0N0 1132 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 MIGA2Q7L4E1 593 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 CYP2W1Q8TAV3 490 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 DAGLAQ9Y4D2 1042 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 GAKO14976 1311 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 EYA4O95677 639 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 GGPS1O95749 300 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 ABL2P42684 1182 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 GPC5P78333 572 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 IRX1P78414 480 aaPredicted RBP22.81■■□□□ 1.24
USP48-205ENST00000421625 ATP11AP98196 1134 aa22.81■■□□□ 1.24
USP48-205ENST00000421625 RPUSD2Q8IZ73 545 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms