RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 LRRN2O75325 713 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 CBX6O95503 412 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 CALCOCO2Q13137 446 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 RCN2Q14257 317 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 CCDC137Q6PK04 289 aaKnown RBP18.31■□□□□ 0.52
PTPRA-205ENST00000399903 USP17L6PQ6QN14 398 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 APBB1IPQ7Z5R6 666 aaPredicted RBP18.31■□□□□ 0.52
PTPRA-205ENST00000399903 DNAJC9Q8WXX5 260 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 ALG3Q92685 438 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 MYLK2Q9H1R3 596 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 KLRG2A4D1S0 409 aaPredicted RBP18.31■□□□□ 0.52
PTPRA-205ENST00000399903 SPAG7O75391 227 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
PTPRA-205ENST00000399903 CAPN12Q6ZSI9 719 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 ECHDC2Q86YB7 292 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 CCDC65Q8IXS2 484 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 SPZ1Q9BXG8 430 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 RNPEPL1Q9HAU8 725 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.31■□□□□ 0.52
PTPRA-205ENST00000399903 ASIC3Q9UHC3 531 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 GSTTP1A0A1W2PQM5 241 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 CES2O00748 559 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 CALB2P22676 271 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 PTDSS1P48651 473 aaKnown RBP18.31■□□□□ 0.52
PTPRA-205ENST00000399903 EN1Q05925 392 aaPredicted RBP18.31■□□□□ 0.52
PTPRA-205ENST00000399903 GABPAQ06546 454 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 MESDQ14696 234 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 ARHGEF26Q96DR7 871 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 MASTLQ96GX5 879 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 PWWP2AQ96N64 755 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 TAOK3Q9H2K8 898 aa18.31■□□□□ 0.52
PTPRA-205ENST00000399903 AFPP02771 609 aaKnown RBP18.3■□□□□ 0.52
PTPRA-205ENST00000399903 PON1P27169 355 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 ALDH1B1P30837 517 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 DNAJC3Q13217 504 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 SPOCK2Q92563 424 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 UTP4Q969X6 686 aaKnown RBP18.3■□□□□ 0.52
PTPRA-205ENST00000399903 JMJD4Q9H9V9 463 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 ECE2O60344 883 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 STAT1P42224 750 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 ROR2Q01974 943 aaKnown RBP18.3■□□□□ 0.52
PTPRA-205ENST00000399903 MGAT5Q09328 741 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 KYNUQ16719 465 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 GALNTL6Q49A17 601 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 C10orf76Q5T2E6 689 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 RASGEF1CQ8N431 466 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 KRT35Q92764 455 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 NAP1L3Q99457 506 aaPredicted RBP18.3■□□□□ 0.52
PTPRA-205ENST00000399903 DDX60LQ5H9U9 1706 aaKnown RBP18.3■□□□□ 0.52
PTPRA-205ENST00000399903 NAV1Q8NEY1 1877 aa18.3■□□□□ 0.52
PTPRA-205ENST00000399903 MEIS1O00470 390 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 RTN3O95197 1032 aaPredicted RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 TTLL1O95922 423 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 HES6Q96HZ4 224 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 TAS2R14Q9NYV8 317 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 PFASO15067 1338 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 ABCB11O95342 1321 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 BRWD3Q6RI45 1802 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 CLRN2A0PK11 232 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 PEX5P50542 639 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 MRPS35P82673 323 aaKnown RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 MPP2Q14168 576 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 RBM26Q5T8P6 1007 aaKnown RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 DDX50Q9BQ39 737 aaKnown RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 THAP2Q9H0W7 228 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 TXLNGQ9NUQ3 528 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 ADAMTSL1Q8N6G6 1762 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 POTEB3A0JP26 581 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 POTECB2RU33 542 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 UNC5CO95185 931 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 GM2AP17900 193 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 CASP4P49662 377 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 POU5F1Q01860 360 aaKnown RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 CTTNQ14247 550 aaKnown RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 USH1GQ495M9 461 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 ZNF746Q6NUN9 644 aaPredicted RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 POTEBQ6S5H4 581 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 MFN1Q8IWA4 741 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 TEX9Q8N6V9 391 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 STK32AQ8WU08 396 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 SCFD1Q8WVM8 642 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 VCXQ9H320 206 aa18.29■□□□□ 0.52
PTPRA-205ENST00000399903 CDC42EP4Q9H3Q1 356 aaKnown RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 BZW2Q9Y6E2 419 aaKnown RBP18.29■□□□□ 0.52
PTPRA-205ENST00000399903 TCRBV7S2A1N4TA0A589 114 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 H0YIN7 160 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 TNFAIP3P21580 790 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 CASP5P51878 434 aa18.28■□□□□ 0.52
PTPRA-205ENST00000399903 PLS1Q14651 629 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms