RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 CYP3A4P08684 503 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 HARSP12081 509 aaKnown RBP12.21□□□□□ -0.46
RCC1-204ENST00000398958 ABCB4P21439 1286 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 PPP2R2AP63151 447 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 ZNF844Q08AG5 666 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 CRYMQ14894 314 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 UAP1Q16222 522 aaPredicted RBP12.21□□□□□ -0.46
RCC1-204ENST00000398958 TKFCQ3LXA3 575 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 FAM102BQ5T8I3 360 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 DCAF15Q66K64 600 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 RUFY4Q6ZNE9 571 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 CPLX4Q7Z7G2 160 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 C3orf20Q8ND61 904 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 HVCN1Q96D96 273 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 ACP6Q9NPH0 428 aa12.21□□□□□ -0.46
RCC1-204ENST00000398958 CNOT8Q9UFF9 292 aaKnown RBP12.21□□□□□ -0.46
RCC1-204ENST00000398958 NOVA2Q9UNW9 492 aaKnown RBP12.21□□□□□ -0.46
RCC1-204ENST00000398958 A0A1B0GUA9 196 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 SSU72P8A0A1W2PR75 194 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 K7ENM7 598 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 CSDE1O75534 798 aaKnown RBP12.2□□□□□ -0.46
RCC1-204ENST00000398958 SLC8A1P32418 973 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 GBP2P32456 591 aaPredicted RBP12.2□□□□□ -0.46
RCC1-204ENST00000398958 NAA25Q14CX7 972 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 EPHA7Q15375 998 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 DPY19L2P1Q6NXN4 242 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 IRF2BP2Q7Z5L9 587 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 DAW1Q8N136 415 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 USP38Q8NB14 1042 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 TAF4BQ92750 862 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 LRRC45Q96CN5 670 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 TEKT3Q9BXF9 490 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 ISCUQ9H1K1 167 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 TRAF3IP3Q9Y228 551 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 SBF1O95248 1867 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 H0YGN5 161 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 PDXKO00764 312 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 WDR46O15213 610 aaKnown RBP12.2□□□□□ -0.46
RCC1-204ENST00000398958 PPP1R12BO60237 982 aaPredicted RBP12.2□□□□□ -0.46
RCC1-204ENST00000398958 GNA14O95837 355 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 SATB1Q01826 763 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 BIRC3Q13489 604 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 BYSLQ13895 437 aaKnown RBP12.2□□□□□ -0.46
RCC1-204ENST00000398958 PGM5Q15124 567 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 Q3C1V9 767 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 SEZ6Q53EL9 994 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 MEI1Q5TIA1 1274 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 GKAP1Q5VSY0 366 aaPredicted RBP12.2□□□□□ -0.46
RCC1-204ENST00000398958 SWSAP1Q6NVH7 229 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 PADI6Q6TGC4 694 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 TRIM50Q86XT4 487 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 MTMR14Q8NCE2 650 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 MAGEC3Q8TD91 643 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 U2AF1L4Q8WU68 220 aaKnown RBP12.2□□□□□ -0.46
RCC1-204ENST00000398958 FAXDC2Q96IV6 333 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 FIZ1Q96SL8 496 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 MXRA8Q9BRK3 442 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 KIAA1683Q9H0B3 1180 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 VPS33BQ9H267 617 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 SLC24A3Q9HC58 644 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 SIX2Q9NPC8 291 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 LUC7LQ9NQ29 371 aaKnown RBP12.2□□□□□ -0.46
RCC1-204ENST00000398958 BTBD7Q9P203 1132 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 CSADQ9Y600 493 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 NFS1Q9Y697 457 aa12.2□□□□□ -0.46
RCC1-204ENST00000398958 KCNK3O14649 394 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 EXOC3O60645 756 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 CALCAP01258 141 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 SP2Q02086 613 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 IFFO1Q0D2I5 559 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 XRCC4Q13426 336 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 NAB2Q15742 525 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 SLC18A3Q16572 532 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 LMBRD2Q68DH5 695 aaPredicted RBP12.19□□□□□ -0.46
RCC1-204ENST00000398958 ZNF720Q7Z2F6 126 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 ADAT2Q7Z6V5 191 aaKnown RBP12.19□□□□□ -0.46
RCC1-204ENST00000398958 FAM160B2Q86V87 743 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 TBC1D31Q96DN5 1066 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 CBWD1Q9BRT8 395 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 BAIAP2L1Q9UHR4 511 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 SLC16A4O15374 487 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 TBC1D12O60347 775 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 CCNE2O96020 404 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 NR3C2P08235 984 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
RCC1-204ENST00000398958 MAGOHP61326 146 aaKnown RBP12.19□□□□□ -0.46
RCC1-204ENST00000398958 SF3A3Q12874 501 aaKnown RBP eCLIP12.19□□□□□ -0.462e-8■■■■□ 23.3
RCC1-204ENST00000398958 PPP2R5CQ13362 524 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 LACTB2Q53H82 288 aaPredicted RBP12.19□□□□□ -0.46
RCC1-204ENST00000398958 XKR9Q5GH70 373 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 CDR2LQ86X02 465 aaPredicted RBP12.19□□□□□ -0.46
RCC1-204ENST00000398958 PALB2Q86YC2 1186 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 TATDN2Q93075 761 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 MAGOHBQ96A72 148 aaKnown RBP12.19□□□□□ -0.46
RCC1-204ENST00000398958 ATP6V0A4Q9HBG4 840 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 TXNRD2Q9NNW7 524 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 FBXL5Q9UKA1 691 aa12.19□□□□□ -0.46
RCC1-204ENST00000398958 SNCAIPQ9Y6H5 919 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms