RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 SMG8Q8ND04 991 aaKnown RBP15.72■□□□□ 0.11
HDDC2-202ENST00000398153 URGCPQ8TCY9 931 aa15.72■□□□□ 0.11
HDDC2-202ENST00000398153 LRRC15Q8TF66 581 aa15.72■□□□□ 0.11
HDDC2-202ENST00000398153 REEP2Q9BRK0 252 aa15.72■□□□□ 0.11
HDDC2-202ENST00000398153 SCAND2PQ9GZW5 306 aaPredicted RBP15.72■□□□□ 0.11
HDDC2-202ENST00000398153 CWH43Q9H720 699 aa15.72■□□□□ 0.11
HDDC2-202ENST00000398153 PARVGQ9HBI0 331 aa15.72■□□□□ 0.11
HDDC2-202ENST00000398153 TNFSF13BQ9Y275 285 aa15.72■□□□□ 0.11
HDDC2-202ENST00000398153 COL4A4P53420 1690 aaPredicted RBP15.72■□□□□ 0.11
HDDC2-202ENST00000398153 KIAA1671Q9BY89 1806 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 SFI1A8K8P3 1242 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 B4GALT5O43286 388 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
HDDC2-202ENST00000398153 FAM13AO94988 1023 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 NCKAP1LP55160 1127 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 RAD51AP2Q09MP3 1159 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 STRN3Q13033 797 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 TMEM132AQ24JP5 1023 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 LRRC55Q6ZSA7 311 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 IQUBQ8NA54 791 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 TMEM161BQ8NDZ6 487 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 GDPD5Q8WTR4 605 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 EIF2AQ9BY44 585 aaKnown RBP15.71■□□□□ 0.11
HDDC2-202ENST00000398153 MRPL4Q9BYD3 311 aaKnown RBP15.71■□□□□ 0.11
HDDC2-202ENST00000398153 PDZD7Q9H5P4 517 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 MAGEF1Q9HAY2 307 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 POLD4Q9HCU8 107 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 FAM13BQ9NYF5 915 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 SEL1LQ9UBV2 794 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 STK39Q9UEW8 545 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 PCDHA7Q9UN72 937 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 PLAGL2Q9UPG8 496 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 LZTS1Q9Y250 596 aa15.71■□□□□ 0.11
HDDC2-202ENST00000398153 MAPTP10636 758 aaKnown RBP15.7■□□□□ 0.1
HDDC2-202ENST00000398153 ALDH7A1P49419 539 aaKnown RBP15.7■□□□□ 0.1
HDDC2-202ENST00000398153 AMPD3Q01432 767 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 PLCB3Q01970 1234 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 DHX8Q14562 1220 aaKnown RBP15.7■□□□□ 0.1
HDDC2-202ENST00000398153 FOXD4L6Q3SYB3 417 aaPredicted RBP15.7■□□□□ 0.1
HDDC2-202ENST00000398153 TIGD5Q53EQ6 642 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 ATF7IP2Q5U623 682 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 ADALQ6DHV7 355 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 PDE12Q6L8Q7 609 aaKnown RBP15.7■□□□□ 0.1
HDDC2-202ENST00000398153 SHC4Q6S5L8 630 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 KCNT2Q6UVM3 1135 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 FOXD4L3Q6VB84 417 aaPredicted RBP15.7■□□□□ 0.1
HDDC2-202ENST00000398153 MYCT1Q8N699 235 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 KLHL23Q8NBE8 558 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 COLGALT1Q8NBJ5 622 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 LPPQ93052 612 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 SPATA32Q96LK8 384 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 ZNF558Q96NG5 402 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 ACO2Q99798 780 aaKnown RBP15.7■□□□□ 0.1
HDDC2-202ENST00000398153 KIFC3Q9BVG8 833 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 TNMDQ9H2S6 317 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 ST6GALNAC4Q9H4F1 302 aa15.7■□□□□ 0.1
HDDC2-202ENST00000398153 SLC16A4O15374 487 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 TRAK2O60296 914 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 NPTXRO95502 500 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 GAP43P17677 238 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 KRT17Q04695 432 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 RNASELQ05823 741 aaKnown RBP15.69■□□□□ 0.1
HDDC2-202ENST00000398153 E2F4Q16254 413 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 NT5DC1Q5TFE4 455 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 RESP18Q5W5W9 173 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 ZPBP2Q6X784 338 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 HAUS6Q7Z4H7 955 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 SPPL3Q8TCT6 385 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 DDX12PQ92771 950 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 TBC1D13Q9NVG8 400 aa15.69■□□□□ 0.1
HDDC2-202ENST00000398153 PUF60Q9UHX1 559 aaKnown RBP15.69■□□□□ 0.1
HDDC2-202ENST00000398153 NPHP3-ACAD11A0A0J9YXS1 232 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 ARL5CA6NH57 179 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 MEIS3P2A8K0S8 358 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 NCK2O43639 380 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 TOM1L1O75674 476 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 FGF18O76093 207 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 ITGB1P05556 798 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 LIG1P18858 919 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 TAS1R3Q7RTX0 852 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 FAM178BQ8IXR5 827 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 THNSL1Q8IYQ7 743 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 PDILTQ8N807 584 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
HDDC2-202ENST00000398153 PPP2R3CQ969Q6 453 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 FAM193BQ96PV7 902 aaPredicted RBP15.68■□□□□ 0.1
HDDC2-202ENST00000398153 TMEM175Q9BSA9 504 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 PANK2Q9BZ23 570 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 NXF3Q9H4D5 531 aaKnown RBP15.68■□□□□ 0.1
HDDC2-202ENST00000398153 PTPRHQ9HD43 1115 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 KBTBD4Q9NVX7 518 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 SPG21Q9NZD8 308 aa15.68■□□□□ 0.1
HDDC2-202ENST00000398153 A0A087X0B3 334 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 FSD2A1L4K1 749 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 MYMKA6NI61 221 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 TTLL13PA6NNM8 815 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 GRM6O15303 877 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 NR1I2O75469 434 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 ALDH2P05091 517 aa15.67■□□□□ 0.1
HDDC2-202ENST00000398153 MCF2P10911 925 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms