RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 PNMA3Q9UL41 463 aa10□□□□□ -0.81
UCA1-201ENST00000397381 STK38LQ9Y2H1 464 aa10□□□□□ -0.81
UCA1-201ENST00000397381 FRMD4BQ9Y2L6 1034 aa10□□□□□ -0.81
UCA1-201ENST00000397381 RTCBQ9Y3I0 505 aaKnown RBP10□□□□□ -0.81
UCA1-201ENST00000397381 CNTNAP4Q9C0A0 1308 aa10□□□□□ -0.81
UCA1-201ENST00000397381 A6NHS1 94 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L15C9J2P7 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L13C9JLJ4 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 ANKRD63C9JTQ0 380 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L11C9JVI0 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L18D6R9N7 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L22D6RA61 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L17D6RBQ6 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L19D6RCP7 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L20D6RJB6 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 HIP1RO75146 1068 aa10□□□□□ -0.81
UCA1-201ENST00000397381 FAM13AO94988 1023 aa10□□□□□ -0.81
UCA1-201ENST00000397381 UNC5CO95185 931 aa10□□□□□ -0.81
UCA1-201ENST00000397381 FTLP02792 175 aaPredicted RBP10□□□□□ -0.81
UCA1-201ENST00000397381 COMTP21964 271 aa10□□□□□ -0.81
UCA1-201ENST00000397381 STX2P32856 288 aa10□□□□□ -0.81
UCA1-201ENST00000397381 ARHGAP4P98171 946 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L24Q0WX57 530 aa10□□□□□ -0.81
UCA1-201ENST00000397381 STRN3Q13033 797 aa10□□□□□ -0.81
UCA1-201ENST00000397381 MTFR1Q15390 333 aa10□□□□□ -0.81
UCA1-201ENST00000397381 LONRF1Q17RB8 773 aa10□□□□□ -0.81
UCA1-201ENST00000397381 USP17L6PQ6QN14 398 aa10□□□□□ -0.81
UCA1-201ENST00000397381 PPP1R21Q6ZMI0 780 aa10□□□□□ -0.81
UCA1-201ENST00000397381 ARHGEF18Q6ZSZ5 1173 aa10□□□□□ -0.81
UCA1-201ENST00000397381 HS2ST1Q7LGA3 356 aa10□□□□□ -0.81
UCA1-201ENST00000397381 ZDHHC14Q8IZN3 488 aa10□□□□□ -0.81
UCA1-201ENST00000397381 AGGF1Q8N302 714 aaeCLIP10□□□□□ -0.814e-7■■□□□ 13
UCA1-201ENST00000397381 ZNF483Q8TF39 744 aaPredicted RBP10□□□□□ -0.81
UCA1-201ENST00000397381 C7orf43Q8WVR3 580 aa10□□□□□ -0.81
UCA1-201ENST00000397381 CRYGNQ8WXF5 182 aa10□□□□□ -0.81
UCA1-201ENST00000397381 CD101Q93033 1021 aa10□□□□□ -0.81
UCA1-201ENST00000397381 TGS1Q96RS0 853 aaKnown RBP10□□□□□ -0.81
UCA1-201ENST00000397381 RUSC1Q9BVN2 902 aa10□□□□□ -0.81
UCA1-201ENST00000397381 BHMT2Q9H2M3 363 aa10□□□□□ -0.81
UCA1-201ENST00000397381 DMAC2Q9NW81 257 aa10□□□□□ -0.81
UCA1-201ENST00000397381 NKIRAS1Q9NYS0 192 aa10□□□□□ -0.81
UCA1-201ENST00000397381 SEL1LQ9UBV2 794 aa10□□□□□ -0.81
UCA1-201ENST00000397381 NARFQ9UHQ1 456 aa10□□□□□ -0.81
UCA1-201ENST00000397381 LGALS13Q9UHV8 139 aa10□□□□□ -0.81
UCA1-201ENST00000397381 RABGAP1Q9Y3P9 1069 aa10□□□□□ -0.81
UCA1-201ENST00000397381 ACTL7BQ9Y614 415 aa10□□□□□ -0.81
UCA1-201ENST00000397381 TMEM110-MUSTN1A8MSY1 372 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 A8MUI8 341 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 ABLIM1O14639 778 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 SKAP2O75563 359 aaPredicted RBP9.99□□□□□ -0.81
UCA1-201ENST00000397381 TTC4O95801 387 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 PYGMP11217 842 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 BRAFP15056 766 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 MARCKSL1P49006 195 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 SIX1Q15475 284 aaPredicted RBP9.99□□□□□ -0.81
UCA1-201ENST00000397381 TAF11Q15544 211 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 ARHGAP44Q17R89 818 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 CBWD6Q4V339 395 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 PRR16Q569H4 304 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 CBWD3Q5JTY5 395 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 CBWD5Q5RIA9 395 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 RHBDF2Q6PJF5 856 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 OTUD6AQ7L8S5 288 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 PALB2Q86YC2 1186 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 ANKRD42Q8N9B4 389 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 UIMC1Q96RL1 719 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 SH3GL3Q99963 347 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 ADGRA3Q8IWK6 1321 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 FOXN3O00409 490 aaPredicted RBP9.99□□□□□ -0.81
UCA1-201ENST00000397381 MAN1A1P33908 653 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 SLC16A2P36021 539 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 EIF6P56537 245 aaKnown RBP9.99□□□□□ -0.81
UCA1-201ENST00000397381 KCNA1Q09470 495 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 GRAPQ13588 217 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 MESDQ14696 234 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 RINT1Q6NUQ1 792 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 RNF207Q6ZRF8 634 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 INTS8Q75QN2 995 aaKnown RBP9.99□□□□□ -0.81
UCA1-201ENST00000397381 GRAPLQ8TC17 118 aaPredicted RBP9.99□□□□□ -0.81
UCA1-201ENST00000397381 MAIP1Q8WWC4 291 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 RMDN2Q96LZ7 410 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 TMEM237Q96Q45 408 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 DDX23Q9BUQ8 820 aaKnown RBP9.99□□□□□ -0.81
UCA1-201ENST00000397381 PLVAPQ9BX97 442 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 LRMDAQ9H2I8 198 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 AAASQ9NRG9 546 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 ZFATQ9P243 1243 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 PTPN22Q9Y2R2 807 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 THRAP3Q9Y2W1 955 aaKnown RBP9.99□□□□□ -0.81
UCA1-201ENST00000397381 LRRC42Q9Y546 428 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 PCDHA1Q9Y5I3 950 aa9.99□□□□□ -0.81
UCA1-201ENST00000397381 ACSL3O95573 720 aa9.98□□□□□ -0.81
UCA1-201ENST00000397381 FOSP01100 380 aaPredicted RBP9.98□□□□□ -0.81
UCA1-201ENST00000397381 GZMAP12544 262 aa9.98□□□□□ -0.81
UCA1-201ENST00000397381 IL1R1P14778 569 aa9.98□□□□□ -0.81
UCA1-201ENST00000397381 GNAZP19086 355 aa9.98□□□□□ -0.81
UCA1-201ENST00000397381 RWDD2BP57060 319 aa9.98□□□□□ -0.81
UCA1-201ENST00000397381 MYBPC2Q14324 1141 aa9.98□□□□□ -0.81
UCA1-201ENST00000397381 SETDB1Q15047 1291 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms