RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ALDH1A2O94788 518 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 PMS2P54278 862 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 GPS1Q13098 491 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 MICU2Q8IYU8 434 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 EML4Q9HC35 981 aaKnown RBP13.04□□□□□ -0.32
SMU1-201ENST00000397149 M0R3G1 203 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 SUPT20HL1Q3ZLR7 823 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 TBC1D9BQ66K14 1250 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 GSPT2Q8IYD1 628 aaKnown RBP13.04□□□□□ -0.32
SMU1-201ENST00000397149 BHMTQ93088 406 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 GFM2Q969S9 779 aaKnown RBP13.04□□□□□ -0.32
SMU1-201ENST00000397149 PRPF18Q99633 342 aaKnown RBP13.04□□□□□ -0.32
SMU1-201ENST00000397149 FAM129AQ9BZQ8 928 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 KRT84Q9NSB2 600 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 TP53BP2Q13625 1128 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 SLFN12LQ6IEE8 588 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 PIGOQ8TEQ8 1089 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 CNKSR1Q969H4 720 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 CNGB3Q9NQW8 809 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 ASNSD1Q9NWL6 643 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
SMU1-201ENST00000397149 PPIP5K1Q6PFW1 1433 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 TRIM13O60858 407 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 MTRF1O75570 445 aaKnown RBP13.04□□□□□ -0.32
SMU1-201ENST00000397149 PCSK7Q16549 785 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 POTEEQ6S8J3 1075 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 CNBD2Q96M20 576 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 ADAM21Q9UKJ8 722 aa13.04□□□□□ -0.32
SMU1-201ENST00000397149 SERPINB1P30740 379 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 PLOD1Q02809 727 aaPredicted RBP13.03□□□□□ -0.32
SMU1-201ENST00000397149 NFIL3Q16649 462 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 TMEM270Q6UE05 265 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 ZNF496Q96IT1 587 aaPredicted RBP13.03□□□□□ -0.32
SMU1-201ENST00000397149 TGS1Q96RS0 853 aaKnown RBP13.03□□□□□ -0.32
SMU1-201ENST00000397149 PCDHA7Q9UN72 937 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.03□□□□□ -0.32
SMU1-201ENST00000397149 PIPSLA2A3N6 862 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 DGKIO75912 1065 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 DEFA1P59665 94 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 DEFA3P59666 94 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 PSMC6P62333 389 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 ZNF211Q13398 564 aaPredicted RBP13.03□□□□□ -0.32
SMU1-201ENST00000397149 INPP5AQ14642 412 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 VEPH1Q14D04 833 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 LAYNQ6UX15 382 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 TMEM63CQ9P1W3 806 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 STOML1Q9UBI4 398 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 MAN2A1Q16706 1144 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 FAM47DPA6NHR8 397 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 CYP7B1O75881 506 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 CYBBP04839 570 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 CTSWP56202 376 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 ANKMY2Q8IV38 441 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 RABGGTAQ92696 567 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 TSEN34Q9BSV6 310 aaKnown RBP13.03□□□□□ -0.32
SMU1-201ENST00000397149 CD274Q9NZQ7 290 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 ALDH1A1P00352 501 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 SERPING1P05155 500 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 PDIA2Q13087 525 aaKnown RBP13.03□□□□□ -0.32
SMU1-201ENST00000397149 ANKS6Q68DC2 871 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 ZBED8Q8IZ13 594 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 PGBD4Q96DM1 585 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 VPS50Q96JG6 964 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 KLHL25Q9H0H3 589 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 CNOT8Q9UFF9 292 aaKnown RBP13.03□□□□□ -0.32
SMU1-201ENST00000397149 IKBKBO14920 756 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 GCP02774 474 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 RHPN2Q8IUC4 686 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 OMA1Q96E52 524 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 PIGSQ96S52 555 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 KIFC1Q9BW19 673 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 CARD9Q9H257 536 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
SMU1-201ENST00000397149 USP14P54578 494 aa13.02□□□□□ -0.32
SMU1-201ENST00000397149 MAGOHP61326 146 aaKnown RBP13.02□□□□□ -0.32
SMU1-201ENST00000397149 BTBD8Q5XKL5 378 aa13.02□□□□□ -0.32
SMU1-201ENST00000397149 FBXW10Q5XX13 1052 aa13.02□□□□□ -0.32
SMU1-201ENST00000397149 PID1Q7Z2X4 250 aa13.02□□□□□ -0.32
SMU1-201ENST00000397149 DCDC2Q9UHG0 476 aa13.02□□□□□ -0.32
SMU1-201ENST00000397149 IQCMA0A1B0GVH7 501 aa13.02□□□□□ -0.32
SMU1-201ENST00000397149 EYA1Q99502 592 aa13.02□□□□□ -0.32
SMU1-201ENST00000397149 A0A087X0T9 212 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 SESN2P58004 480 aaPredicted RBP13.02□□□□□ -0.33
SMU1-201ENST00000397149 RBBP4Q09028 425 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 NAALADL2Q58DX5 795 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 MUC3BQ9H195 1237 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 PYCARDQ9ULZ3 195 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 CLDN3O15551 220 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 SGSM2O43147 1006 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.33
SMU1-201ENST00000397149 ETNK1Q9HBU6 452 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 UBAP1Q9NZ09 502 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 NLRP11P59045 1033 aaKnown RBP13.02□□□□□ -0.33
SMU1-201ENST00000397149 SARM1Q6SZW1 724 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 WDR11Q9BZH6 1224 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms