RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 SMAD4Q13485 552 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 SMAD2Q15796 467 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 EEF1DP3Q658K8 133 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 SYCE2Q6PIF2 218 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TAS1R1Q7RTX1 841 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MRPL10Q7Z7H8 261 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 VPS52Q8N1B4 723 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 SMRP1Q8NCR6 262 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 IGSF21Q96ID5 467 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 RUSC1Q9BVN2 902 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TRAIPQ9BWF2 469 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MRPL9Q9BYD2 267 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ZBP1Q9H171 429 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 BHMT2Q9H2M3 363 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PPME1Q9Y570 386 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 KMT2EQ8IZD2 1858 aa12.87□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ARL5CA6NH57 179 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 C2CD2LO14523 706 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ASAP2O43150 1006 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CLASP2O75122 1294 aaKnown RBP12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ITGA4P13612 1032 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 EPCAMP16422 314 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NCLP19338 710 aaKnown RBP12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 IGFBP6P24592 240 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PPM1AP35813 382 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ALDH7A1P49419 539 aaKnown RBP12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 GRIN1Q05586 938 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 KCNC3Q14003 757 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TFDP1Q14186 410 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MXD4Q14582 209 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NOTUMQ6P988 496 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TMEM130Q8N3G9 435 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 LRRC15Q8TF66 581 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TMEM169Q96HH4 297 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NACC1Q96RE7 527 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CSRNP2Q9H175 543 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MUTYHQ9UIF7 546 aa12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 DBR1Q9UK59 544 aaKnown RBP12.86□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PRKCBP05771 671 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TRAPPC10P48553 1259 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 SMC1AQ14683 1233 aaKnown RBP12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CSPP1Q1MSJ5 1256 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CDCA2Q69YH5 1023 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ADHFE1Q8IWW8 467 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 EXOC8Q8IYI6 725 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 IGSF22Q8N9C0 903 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 GSTCDQ8NEC7 633 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ERMNQ8TAM6 284 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PPP2R3CQ969Q6 453 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PGBD4Q96DM1 585 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PNMA5Q96PV4 448 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 LRFN3Q9BTN0 628 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PDZD7Q9H5P4 517 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PARP2Q9UGN5 583 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 SMC3Q9UQE7 1217 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 LZTS1Q9Y250 596 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 HCFC2Q9Y5Z7 792 aa12.85□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TCHHQ07283 1943 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NPHP3-ACAD11A0A0J9YXS1 232 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 VWA3AA6NCI4 1184 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 H3BQV1 296 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NRP1O14786 923 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 EYA4O95677 639 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CXCL14O95715 111 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CYP11B2P19099 503 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 OR1G1P47890 313 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 KRT17Q04695 432 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 COASYQ13057 564 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PTPN14Q15678 1187 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 ANKRD54Q6NXT1 300 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 FAM173BQ6P4H8 233 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 GLYCTKQ8IVS8 523 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 COLGALT2Q8IYK4 626 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 DAW1Q8N136 415 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MRPL43Q8N983 215 aaKnown RBP12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 MCPH1Q8NEM0 835 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 HASPINQ8TF76 798 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 TRIM6Q9C030 488 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CCDC113Q9H0I3 377 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 S1PR5Q9H228 398 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 PUF60Q9UHX1 559 aaKnown RBP12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 CNTNAP2Q9UHC6 1331 aa12.84□□□□□ -0.35
HLA-DQA1-203ENST00000395363 NOTCH4Q99466 2003 aa12.83□□□□□ -0.36
HLA-DQA1-203ENST00000395363 VPS37CA5D8V6 355 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQA1-203ENST00000395363 SFI1A8K8P3 1242 aa12.83□□□□□ -0.36
HLA-DQA1-203ENST00000395363 NCK2O43639 380 aa12.83□□□□□ -0.36
HLA-DQA1-203ENST00000395363 HIP1RO75146 1068 aa12.83□□□□□ -0.36
HLA-DQA1-203ENST00000395363 SKIP12755 728 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms