RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 TUFT1Q9NNX1 390 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 EDRF1Q3B7T1 1238 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
CXCL12-203ENST00000374429 TSEN2Q8NCE0 465 aaKnown RBP11.66□□□□□ -0.54
CXCL12-203ENST00000374429 KCND1Q9NSA2 647 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 SLC9A2Q9UBY0 812 aa11.66□□□□□ -0.54
CXCL12-203ENST00000374429 PI4K2BG5E9Z4 385 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 GOLGA8SH3BPF8 625 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 GGPS1O95749 300 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 VGLL4Q14135 290 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 GPR162Q16538 588 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 BTNL9Q6UXG8 535 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 LNX1Q8TBB1 728 aaPredicted RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 C1orf54Q8WWF1 131 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 SLC7A3Q8WY07 619 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 SEMA4DQ92854 862 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 TEPSINQ96N21 525 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 C11orf70Q9BRQ4 267 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 MLXIPLQ9NP71 852 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 STIM2Q9P246 746 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 APEX2Q9UBZ4 518 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 FBXO40Q9UH90 709 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 F8VZ95 297 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 WEE2P0C1S8 567 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 CIITAP33076 1130 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 PTGER2P43116 358 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 PPATQ06203 517 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 CCDC105Q8IYK2 499 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 SCYL3Q8IZE3 742 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 KRT35Q92764 455 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 PPANQ9NQ55 473 aaKnown RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 NOC2LQ9Y3T9 749 aaKnown RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 SART1O43290 800 aaKnown RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 MYCP01106 439 aaPredicted RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 PLS3P13797 630 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 FGFR4P22455 802 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 PIK3CAP42336 1068 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 DYNLT1P63172 113 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 SETQ01105 290 aaPredicted RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 PDCLQ13371 301 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 NAB2Q15742 525 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 PAPD7Q5XG87 772 aaKnown RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 CCNI2Q6ZMN8 369 aaPredicted RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 OTUD6AQ7L8S5 288 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 PLEKHO2Q8TD55 490 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 TEX13BQ9BXU2 312 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 TRAF3IP3Q9Y228 551 aa11.65□□□□□ -0.54
CXCL12-203ENST00000374429 RRP15Q9Y3B9 282 aaKnown RBP11.65□□□□□ -0.54
CXCL12-203ENST00000374429 H0YHG0 523 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 PIAS1O75925 651 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 SARNPP82979 210 aaKnown RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 PPP2R5CQ13362 524 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 FAM83AQ86UY5 434 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 MGARPQ8TDB4 240 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 ATG4AQ8WYN0 398 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 FHDC1Q9C0D6 1143 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 TMEM117Q9H0C3 514 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 AS3MTQ9HBK9 375 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 PCDHB4Q9Y5E5 795 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 KIAA1551Q9HCM1 1747 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 A0A1W2PQJ5 194 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 GNPTABQ3T906 1256 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 MAP1SQ66K74 1059 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 RNF149Q8NC42 400 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 MSTO1Q9BUK6 570 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 FAM49AQ9H0Q0 323 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 AZI2Q9H6S1 392 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 ACAD9Q9H845 621 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 DHX15O43143 795 aaKnown RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 KIF4AO95239 1232 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 MAP3K6O95382 1288 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 ATF7P17544 494 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 CCDC33Q8N5R6 958 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 MAGOHBQ96A72 148 aaKnown RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.64□□□□□ -0.55
CXCL12-203ENST00000374429 TBX20Q9UMR3 447 aa11.64□□□□□ -0.55
CXCL12-203ENST00000374429 ARAP2Q8WZ64 1704 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 GOLGA6L10A6NI86 522 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 FERP16591 822 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 CLCN3P51790 818 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 NLRP11P59045 1033 aaKnown RBP11.63□□□□□ -0.55
CXCL12-203ENST00000374429 MAPK7Q13164 816 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 CCDC38Q502W7 563 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 SESTD1Q86VW0 696 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 ATP6V0A1Q93050 837 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 MRIQ9BWK5 157 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 MOV10L1Q9BXT6 1211 aaKnown RBP11.63□□□□□ -0.55
CXCL12-203ENST00000374429 KIAA1683Q9H0B3 1180 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 PDGFCQ9NRA1 345 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 TBC1D22BQ9NU19 505 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 MRPL42Q9Y6G3 142 aaKnown RBP11.63□□□□□ -0.55
CXCL12-203ENST00000374429 GSTTP1A0A1W2PQM5 241 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 KIF1CO43896 1103 aaKnown RBP11.63□□□□□ -0.55
CXCL12-203ENST00000374429 IFNB1P01574 187 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 FLT3P36888 993 aa11.63□□□□□ -0.55
CXCL12-203ENST00000374429 TNNC1P63316 161 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms