RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 EXTL3O43909 919 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 HBP1O60381 514 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 GH1P01241 217 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 IFNB1P01574 187 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PRKCBP05771 671 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SUPT20HL2P0C7V6 817 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 RSPH10BP0C881 870 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 TGFB3P10600 412 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ACTN1P12814 892 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CD58P19256 250 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 GTF2H1P32780 548 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PHBP35232 272 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC12A3P55017 1021 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 NPEPPSP55786 919 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 OSTNP61366 133 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SARNPP82979 210 aaKnown RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 NFRKBQ6P4R8 1299 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 TMEM270Q6UE05 265 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 RNF149Q8NC42 400 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 GPRC5AQ8NFJ5 357 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 MYCBPQ99417 103 aaPredicted RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SNX25Q9H3E2 840 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 UVRAGQ9P2Y5 699 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ANAPC7Q9UJX3 599 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 MYPNQ86TC9 1320 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 GARTP22102 1010 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 KLK7P49862 253 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 EIF3BP55884 814 aaKnown RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 TRIM65Q6PJ69 517 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 AMIGO3Q86WK7 504 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SPATA4Q8NEY3 305 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CYP2W1Q8TAV3 490 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF564Q8TBZ8 553 aaPredicted RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 TMEM143Q96AN5 459 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 RBM41Q96IZ5 413 aaKnown RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 CAMKK2Q96RR4 588 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 MAF1Q9H063 256 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 SUCLA2Q9P2R7 463 aaPredicted RBP5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 HDAC6Q9UBN7 1215 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 PCDHAC2Q9Y5I4 1007 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 FAM169AQ9Y6X4 670 aa5.7□□□□□ -1.5
SMNDC1-202ENST00000369603 ATRNL1Q5VV63 1379 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 TRIM66O15016 1216 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 SART1O43290 800 aaKnown RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 RNF40O75150 1001 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ZMYND10O75800 440 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 PSMD10O75832 226 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 TMEM253P0C7T8 217 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 PRLRP16471 622 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 PTPRAP18433 802 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 PON1P27169 355 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 GNA15P30679 374 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 CCT5P48643 541 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 RARRES1P49788 294 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC26A2P50443 739 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 PSMC6P62333 389 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 TAP1Q03518 808 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 MKRN3Q13064 507 aaKnown RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 LAMC2Q13753 1193 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 NPY5RQ15761 445 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF677Q86XU0 584 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 BCAS4Q8TDM0 211 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 MED10Q9BTT4 135 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 GCOM2Q9BZD3 368 aaPredicted RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ERAP1Q9NZ08 941 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 UBR2Q8IWV8 1755 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 COL22A1Q8NFW1 1626 aaPredicted RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 CAPN9O14815 690 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ZC3H11AO75152 810 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ZRANB2O95218 330 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 TBC1D8O95759 1140 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 KRT1P04264 644 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 MAP2K2P36507 400 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC1A1P43005 524 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 NAMPTP43490 491 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 GCLCP48506 637 aaPredicted RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 GALCP54803 685 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ICE2Q659A1 982 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 SCYL2Q6P3W7 929 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ARMCX2Q7L311 632 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 KCNK18Q7Z418 384 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 GABPB2Q8TAK5 448 aaPredicted RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ETNPPLQ8TBG4 499 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 TMC2Q8TDI7 906 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 FBXO41Q8TF61 875 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 FMO2Q99518 471 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 SH2D3AQ9BRG2 576 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 MMTAG2Q9BU76 263 aaKnown RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 NUP85Q9BW27 656 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 APOL6Q9BWW8 343 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 TMEM51Q9NW97 253 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 NUB1Q9Y5A7 615 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 FAM187AA6NFU0 413 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 A6NJR5 290 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 YDJCA8MPS7 323 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 GOLGA8SH3BPF8 625 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 WNT7AO00755 349 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 AKAP3O75969 853 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 H2AFXP16104 143 aaPredicted RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ALDH3A1P30838 453 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms