RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 LRRIQ3A6PVS8 624 aaPredicted RBP15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 ABLIM1O14639 778 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 CYBAP13498 195 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 LIG4P49917 911 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 MCCD1P59942 119 aaPredicted RBP15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 SNRPFP62306 86 aaKnown RBP15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 PPP2R3AQ06190 1150 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 PPFIA1Q13136 1202 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 TRIM65Q6PJ69 517 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 CYP26C1Q6V0L0 522 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 CDR2LQ86X02 465 aaPredicted RBP15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 NAA15Q9BXJ9 866 aaKnown RBP15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 ZMYND15Q9H091 742 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 IFT122Q9HBG6 1241 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 CEP72Q9P209 647 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 ANKFY1Q9P2R3 1169 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 SCN10AQ9Y5Y9 1956 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 TRPA1O75762 1119 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 F2P00734 622 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 HNRNPH3P31942 346 aaKnown RBP15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 ACOT2P49753 483 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 HGSNATQ68CP4 663 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 INTS8Q75QN2 995 aaKnown RBP15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 LMBR1Q8WVP7 490 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 TCP11Q8WWU5 503 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 MFSD14AQ96MC6 490 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 TMEM134Q9H6X4 195 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 PLAGL2Q9UPG8 496 aa15.36■□□□□ 0.05
HMGCS2-201ENST00000369406 THSD7BQ9C0I4 1608 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 ZNF263O14978 683 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 FAM189A1O60320 539 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 UCHL3P15374 230 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 ELNP15502 786 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 GARTP22102 1010 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 VEGFBP49765 207 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 MYL7Q01449 175 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 MBTD1Q05BQ5 628 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 CYP24A1Q07973 514 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 STRN3Q13033 797 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 LMBRD2Q68DH5 695 aaPredicted RBP15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 IQCEQ6IPM2 695 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 GBP6Q6ZN66 633 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 TMTC1Q8IUR5 882 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 PARD3BQ8TEW8 1205 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 TMEM117Q9H0C3 514 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 TULP1O00294 542 aaPredicted RBP15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 ALDH1A1P00352 501 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 ZNF200P98182 395 aaPredicted RBP15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 MXD4Q14582 209 aaPredicted RBP15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 KIAA0753Q2KHM9 967 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 GPD1LQ8N335 351 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 SEMA4DQ92854 862 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 INTS2Q9H0H0 1204 aaKnown RBP15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 PLCB1Q9NQ66 1216 aa15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 ZNF215Q9UL58 517 aaPredicted RBP15.35■□□□□ 0.05
HMGCS2-201ENST00000369406 COL1A2P08123 1366 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 A0A087WZ62 844 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 A0A0B4J269 797 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 GTPBP10A4D1E9 387 aaKnown RBP15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 H0YCG3 227 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 MAPK13O15264 365 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 GAS2O43903 313 aaKnown RBP15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 PRKCBP05771 671 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 SMIM10L2AP0DMW4 78 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 SMIM10L2BP0DMW5 78 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 HARSP12081 509 aaKnown RBP15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 TNFSF9P41273 254 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 IRF5Q13568 498 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 EEF1DP3Q658K8 133 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 RUFY4Q6ZNE9 571 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 ZBTB33Q86T24 672 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 KIAA0319LQ8IZA0 1049 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 ZNF516Q92618 1163 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 FDXACB1Q9BRP7 624 aaPredicted RBP15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 IRX2Q9BZI1 471 aaPredicted RBP15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 NHEJ1Q9H9Q4 299 aaPredicted RBP15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 NRDCO43847 1150 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 MYL3P08590 195 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 KRT13P13646 458 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 JAM2P57087 298 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 PTENP60484 403 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 EPC2Q52LR7 807 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 CACNA2D4Q7Z3S7 1137 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 CD99L2Q8TCZ2 262 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 ACO2Q99798 780 aaKnown RBP15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 GPR88Q9GZN0 384 aa15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 AGO2Q9UKV8 859 aaKnown RBP15.34■□□□□ 0.05
HMGCS2-201ENST00000369406 EXTL3O43909 919 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 NDUFA10O95299 355 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 CCND3P30281 292 aaPredicted RBP15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 SP3Q02447 781 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 MAP2K1Q02750 393 aaPredicted RBP15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 CACNB2Q08289 660 aaPredicted RBP15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 TMEM62Q0P6H9 643 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 MFSD10Q14728 455 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 AMHR2Q16671 573 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 PHLDB3Q6NSJ2 640 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 ARHGEF19Q8IW93 802 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 TMEM130Q8N3G9 435 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms