RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 RSAD1Q9HA92 442 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 PARVGQ9HBI0 331 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 TYW1Q9NV66 732 aaKnown RBP20.39■□□□□ 0.85
CHTOP-202ENST00000368687 IPPQ9Y573 584 aa20.39■□□□□ 0.85
CHTOP-202ENST00000368687 B4GALT5O43286 388 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 ME1P48163 572 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 STRN3Q13033 797 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 MCM6Q14566 821 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 SV2BQ7L1I2 683 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 ZNF558Q96NG5 402 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 MRPL4Q9BYD3 311 aaKnown RBP20.38■□□□□ 0.85
CHTOP-202ENST00000368687 LRRC27Q9C0I9 530 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 STK39Q9UEW8 545 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 GIT1Q9Y2X7 761 aa20.38■□□□□ 0.85
CHTOP-202ENST00000368687 XIRP2A4UGR9 3374 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 SPTBN5Q9NRC6 3674 aaKnown RBP20.37■□□□□ 0.85
CHTOP-202ENST00000368687 INPPL1O15357 1258 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 FAM13AO94988 1023 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 ZNF131P52739 623 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 NUCB2P80303 420 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 DNM1Q05193 864 aaKnown RBP20.37■□□□□ 0.85
CHTOP-202ENST00000368687 RNASELQ05823 741 aaKnown RBP20.37■□□□□ 0.85
CHTOP-202ENST00000368687 ARSHQ5FYA8 562 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 USP49Q70CQ1 688 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 COLGALT1Q8NBJ5 622 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 PPP2R3CQ969Q6 453 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 REEP2Q9BRK0 252 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 KIFC3Q9BVG8 833 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 CWH43Q9H720 699 aa20.37■□□□□ 0.85
CHTOP-202ENST00000368687 OFD1O75665 1012 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 ALDH7A1P49419 539 aaKnown RBP20.36■□□□□ 0.85
CHTOP-202ENST00000368687 RAD51AP2Q09MP3 1159 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 DHX8Q14562 1220 aaKnown RBP20.36■□□□□ 0.85
CHTOP-202ENST00000368687 ATF7IP2Q5U623 682 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 AGMOQ6ZNB7 445 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 THNSL1Q8IYQ7 743 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 MICALL1Q8N3F8 863 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 SMG8Q8ND04 991 aaKnown RBP20.36■□□□□ 0.85
CHTOP-202ENST00000368687 LPPQ93052 612 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 COL25A1Q9BXS0 654 aaPredicted RBP20.36■□□□□ 0.85
CHTOP-202ENST00000368687 EIF2AQ9BY44 585 aaKnown RBP20.36■□□□□ 0.85
CHTOP-202ENST00000368687 SCAND2PQ9GZW5 306 aaPredicted RBP20.36■□□□□ 0.85
CHTOP-202ENST00000368687 PDZD7Q9H5P4 517 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 MAGEF1Q9HAY2 307 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 FAM13BQ9NYF5 915 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 PUF60Q9UHX1 559 aaKnown RBP20.36■□□□□ 0.85
CHTOP-202ENST00000368687 RCOR1Q9UKL0 485 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 PLAGL2Q9UPG8 496 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 LZTS1Q9Y250 596 aa20.36■□□□□ 0.85
CHTOP-202ENST00000368687 NPTXRO95502 500 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 LIG1P18858 919 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 KRT17Q04695 432 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 FOXD4L6Q3SYB3 417 aaPredicted RBP20.35■□□□□ 0.85
CHTOP-202ENST00000368687 PDE12Q6L8Q7 609 aaKnown RBP20.35■□□□□ 0.85
CHTOP-202ENST00000368687 KCNT2Q6UVM3 1135 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 FOXD4L3Q6VB84 417 aaPredicted RBP20.35■□□□□ 0.85
CHTOP-202ENST00000368687 IQUBQ8NA54 791 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 KLHL23Q8NBE8 558 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 TMEM161BQ8NDZ6 487 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 FAM193BQ96PV7 902 aaPredicted RBP20.35■□□□□ 0.85
CHTOP-202ENST00000368687 TBC1D13Q9NVG8 400 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 SEL1LQ9UBV2 794 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 TNFSF13BQ9Y275 285 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 INPP5FQ9Y2H2 1132 aa20.35■□□□□ 0.85
CHTOP-202ENST00000368687 TDRD15B5MCY1 1934 aaKnown RBP20.34■□□□□ 0.85
CHTOP-202ENST00000368687 FSD2A1L4K1 749 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 SLC16A4O15374 487 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 NCK2O43639 380 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 NCKAP1LP55160 1127 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 AMPD3Q01432 767 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 PLCB3Q01970 1234 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 GIT2Q14161 759 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 ZPBP2Q6X784 338 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 LRRC55Q6ZSA7 311 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 MYCT1Q8N699 235 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 TNMDQ9H2S6 317 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 NXF3Q9H4D5 531 aaKnown RBP20.34■□□□□ 0.85
CHTOP-202ENST00000368687 NSUN3Q9H649 340 aaKnown RBP20.34■□□□□ 0.85
CHTOP-202ENST00000368687 POLD4Q9HCU8 107 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 SPG21Q9NZD8 308 aa20.34■□□□□ 0.85
CHTOP-202ENST00000368687 ARL5CA6NH57 179 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 SFI1A8K8P3 1242 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 FGF18O76093 207 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 ITGB1P05556 798 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 MAPTP10636 758 aaKnown RBP20.33■□□□□ 0.85
CHTOP-202ENST00000368687 GAP43P17677 238 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 BMS1Q14692 1282 aaKnown RBP20.33■□□□□ 0.85
CHTOP-202ENST00000368687 AXDND1Q5T1B0 1012 aaPredicted RBP20.33■□□□□ 0.85
CHTOP-202ENST00000368687 FAM178BQ8IXR5 827 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 LRRC15Q8TF66 581 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 SPATA32Q96LK8 384 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 ACO2Q99798 780 aaKnown RBP20.33■□□□□ 0.85
CHTOP-202ENST00000368687 TMEM175Q9BSA9 504 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 PCDHA7Q9UN72 937 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 COG5Q9UP83 839 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 ZDHHC9Q9Y397 364 aa20.33■□□□□ 0.85
CHTOP-202ENST00000368687 PLXNA4Q9HCM2 1894 aa20.33■□□□□ 0.84
CHTOP-202ENST00000368687 TCHHQ07283 1943 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 NPHP3-ACAD11A0A0J9YXS1 232 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 GRM6O15303 877 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms