RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 CLSTN1O94985 981 aa22.03■■□□□ 1.12
COL13A1-202ENST00000357811 RPL21P46778 160 aaKnown RBP22.03■■□□□ 1.12
COL13A1-202ENST00000357811 IFI35P80217 286 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-202ENST00000357811 DUPD1Q68J44 220 aa22.03■■□□□ 1.12
COL13A1-202ENST00000357811 LLGL2Q6P1M3 1020 aa22.03■■□□□ 1.12
COL13A1-202ENST00000357811 DDX20Q9UHI6 824 aaKnown RBP22.03■■□□□ 1.12
COL13A1-202ENST00000357811 DLATP10515 647 aaKnown RBP22.03■■□□□ 1.12
COL13A1-202ENST00000357811 HNRNPH1P31943 449 aaKnown RBP22.03■■□□□ 1.12
COL13A1-202ENST00000357811 CETN1Q12798 172 aa22.03■■□□□ 1.12
COL13A1-202ENST00000357811 CCDC105Q8IYK2 499 aa22.03■■□□□ 1.12
COL13A1-202ENST00000357811 XXYLT1Q8NBI6 393 aa22.03■■□□□ 1.12
COL13A1-202ENST00000357811 RNF25Q96BH1 459 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-202ENST00000357811 KREMEN1Q96MU8 473 aa22.03■■□□□ 1.12
COL13A1-202ENST00000357811 ZNF277Q9NRM2 450 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-202ENST00000357811 COL11A2P13942 1736 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-202ENST00000357811 ATRNL1Q5VV63 1379 aa22.03■■□□□ 1.12
COL13A1-202ENST00000357811 ATP9AO75110 1047 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 GPC5P78333 572 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 KCNV1Q6PIU1 500 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 INTS8Q75QN2 995 aaKnown RBP22.02■■□□□ 1.12
COL13A1-202ENST00000357811 PSMD1Q99460 953 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 HERC5Q9UII4 1024 aaKnown RBP22.02■■□□□ 1.12
COL13A1-202ENST00000357811 A6NNZ2 444 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 PMS2P54278 862 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 TUBB8Q3ZCM7 444 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 LMBRD2Q68DH5 695 aaPredicted RBP22.02■■□□□ 1.12
COL13A1-202ENST00000357811 CCDC137Q6PK04 289 aaKnown RBP22.02■■□□□ 1.12
COL13A1-202ENST00000357811 AKT1S1Q96B36 256 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 AZI2Q9H6S1 392 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 EHMT1Q9H9B1 1298 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 ZDHHC18Q9NUE0 388 aa22.02■■□□□ 1.12
COL13A1-202ENST00000357811 FOXO6A8MYZ6 492 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 KIAA0391O15091 583 aaKnown RBP22.02■■□□□ 1.11
COL13A1-202ENST00000357811 CHRNB2P17787 502 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 TRIP13Q15645 432 aaPredicted RBP22.02■■□□□ 1.11
COL13A1-202ENST00000357811 ZDHHC24Q6UX98 284 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 CPLX4Q7Z7G2 160 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 EPS8L1Q8TE68 723 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 FAM118BQ9BPY3 351 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 NUP85Q9BW27 656 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 TRIM7Q9C029 511 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 EPB41L4BQ9H329 900 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 TCEAL9Q9UHQ7 104 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 TRPC6Q9Y210 931 aa22.02■■□□□ 1.11
COL13A1-202ENST00000357811 P4HBP07237 508 aaKnown RBP22.01■■□□□ 1.11
COL13A1-202ENST00000357811 YWHABP31946 246 aaKnown RBP22.01■■□□□ 1.11
COL13A1-202ENST00000357811 IFNAR2P48551 515 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 BIRC3Q13489 604 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 XKR9Q5GH70 373 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 TEX2Q8IWB9 1127 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 EPS8L3Q8TE67 593 aaKnown RBP22.01■■□□□ 1.11
COL13A1-202ENST00000357811 C1orf54Q8WWF1 131 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.01■■□□□ 1.11
COL13A1-202ENST00000357811 ZNF653Q96CK0 615 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 CABS1Q96KC9 395 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 ACCSQ96QU6 501 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 TESPA1A2RU30 521 aaPredicted RBP22.01■■□□□ 1.11
COL13A1-202ENST00000357811 BHMG1C9JSJ3 638 aaPredicted RBP22.01■■□□□ 1.11
COL13A1-202ENST00000357811 TRAPPC3O43617 180 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 VPS41P49754 854 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 MNAT1P51948 309 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 MRPS9P82933 396 aaKnown RBP22.01■■□□□ 1.11
COL13A1-202ENST00000357811 OGFOD1Q8N543 542 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 UBL4BQ8N7F7 174 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 ZSWIM1Q9BR11 485 aa22.01■■□□□ 1.11
COL13A1-202ENST00000357811 GEMIN8Q9NWZ8 242 aaKnown RBP22.01■■□□□ 1.11
COL13A1-202ENST00000357811 CTNND1O60716 968 aaKnown RBP22■■□□□ 1.11
COL13A1-202ENST00000357811 MTMR1Q13613 665 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 DENND2CQ68D51 928 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 TAAR1Q96RJ0 339 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 YY1AP1Q9H869 796 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 DHX15O43143 795 aaKnown RBP22■■□□□ 1.11
COL13A1-202ENST00000357811 KRT5P13647 590 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 SETQ01105 290 aaPredicted RBP22■■□□□ 1.11
COL13A1-202ENST00000357811 TKFCQ3LXA3 575 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 OTUD6AQ7L8S5 288 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 RHOT2Q8IXI1 618 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 SEC14L1Q92503 715 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 STRA6Q9BX79 667 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 DBR1Q9UK59 544 aaKnown RBP22■■□□□ 1.11
COL13A1-202ENST00000357811 TELO2Q9Y4R8 837 aa22■■□□□ 1.11
COL13A1-202ENST00000357811 PPFIA2O75334 1257 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 QARSP47897 775 aaKnown RBP21.99■■□□□ 1.11
COL13A1-202ENST00000357811 B3GNT9Q6UX72 402 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 ZNF564Q8TBZ8 553 aaPredicted RBP21.99■■□□□ 1.11
COL13A1-202ENST00000357811 NEK9Q8TD19 979 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 NAP1L3Q99457 506 aaPredicted RBP21.99■■□□□ 1.11
COL13A1-202ENST00000357811 GOLGA6L7A0A1B0GV03 622 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 CLDN3O15551 220 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 CPP00450 1065 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 PLS3P13797 630 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 CAP2P40123 477 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 NFIL3Q16649 462 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 MICALCLQ6ZW33 695 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 EIF1ADQ8N9N8 165 aaKnown RBP21.99■■□□□ 1.11
COL13A1-202ENST00000357811 TAS1R2Q8TE23 839 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 ATG4AQ8WYN0 398 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 MTFR1LQ9H019 292 aa21.99■■□□□ 1.11
COL13A1-202ENST00000357811 NPM3O75607 178 aaKnown RBP21.99■■□□□ 1.11
COL13A1-202ENST00000357811 ADSSP30520 456 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms