RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 IQCKQ8N0W5 287 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 IRGQQ8WZA9 623 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 COL22A1Q8NFW1 1626 aaPredicted RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 C10orf71Q711Q0 1435 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 DAPK3O43293 454 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 KRT16P08779 473 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MYL4P12829 197 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MFAP3P55082 362 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 KCNJ2P63252 427 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TMED2Q15363 201 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 ESCO1Q5FWF5 840 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 CTAGE3PQ8IX95 158 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 PRCCQ92733 491 aaPredicted RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 SDCCAG3Q96C92 435 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 PLIN2Q99541 437 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 RANBP17Q9H2T7 1088 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TMEM165Q9HC07 324 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 SLC24A2Q9UI40 661 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MAST2Q6P0Q8 1798 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 DPPA5A6NC42 116 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 POLR2FP61218 127 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TRIM28Q13263 835 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF554Q86TJ5 538 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MS4A14Q96JA4 679 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 RFC1P35251 1148 aaPredicted RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 HK2P52789 917 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 KRT26Q7Z3Y9 468 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 GPIHBP1Q8IV16 184 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 MINDY2Q8NBR6 621 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 DLG3Q92796 817 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TIPINQ9BVW5 301 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 NYXQ9GZU5 481 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 UPF3AQ9H1J1 476 aaKnown RBP6.99□□□□□ -1.29
TRIM38-201ENST00000357085 GPAMQ9HCL2 828 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 FETUBQ9UGM5 382 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 TNS3Q68CZ2 1445 aa6.99□□□□□ -1.29
TRIM38-201ENST00000357085 KIAA0391O15091 583 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 ACSL3O95573 720 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 CALB1P05937 261 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TMEM253P0C7T8 217 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 MTTPP55157 894 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 AP3B2Q13367 1082 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 FAM47EQ6ZV65 393 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TTLL11Q8NHH1 800 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 L3MBTL3Q96JM7 780 aaPredicted RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 GGT7Q9UJ14 662 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 HNRNPRO43390 633 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 ADCY3O60266 1144 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 FAM153BP0C7A2 387 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 KRT4P19013 534 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 CA4P22748 312 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 NCALDP61601 193 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 FAM153CQ494X1 144 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 GPATCH4Q5T3I0 446 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 NELFCDQ8IXH7 590 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 HDAC7Q8WUI4 952 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 GALNT8Q9NY28 637 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 FAM153AQ9UHL3 310 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 SERPINA10Q9UK55 444 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 ARAP2Q8WZ64 1704 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TMEM120BA0PK00 339 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 COQ9O75208 318 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 GZMAP12544 262 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 PLCG1P19174 1290 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 VCAM1P19320 739 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 S100A1P23297 94 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 PSMC2P35998 433 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 HERC4Q5GLZ8 1057 aaPredicted RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 DCAF17Q5H9S7 520 aaPredicted RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 ARMC3Q5W041 872 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 C4orf22Q6V702 233 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 PATL1Q86TB9 770 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 SRBD1Q8N5C6 995 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 CDCA7Q9BWT1 371 aaPredicted RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TMEM206Q9H813 350 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 PANK4Q9NVE7 773 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 SLC5A4Q9NY91 659 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 DDX56Q9NY93 547 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TRIM49BA6NDI0 452 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TBKBP1A7MCY6 615 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 EIF3DO15371 548 aaKnown RBP eCLIP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 TLDC1Q6P9B6 456 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 C16orf89Q6UX73 402 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 GPBP1Q86WP2 473 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 SNRNP27Q8WVK2 155 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 NSL1Q96IY1 281 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 ZNF839A8K0R7 811 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 DEAF1O75398 565 aaPredicted RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 SP100P23497 879 aaPredicted RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 CTSWP56202 376 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 HIC1Q14526 733 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 UHMK1Q8TAS1 419 aaKnown RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 CCDC138Q96M89 665 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 PTTG2Q9NZH5 202 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 GDAQ9Y2T3 454 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 SIPA1L3O60292 1781 aaPredicted RBP6.98□□□□□ -1.29
TRIM38-201ENST00000357085 FANCGO15287 622 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 MUTP22033 750 aa6.98□□□□□ -1.29
TRIM38-201ENST00000357085 PRCPP42785 496 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms