RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 NCAPHQ15003 741 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 ZBED2Q9BTP6 218 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 POTEMA6NI47 508 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 BCAR1P56945 870 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 DDX47Q9H0S4 455 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 FARP1Q9Y4F1 1045 aaPredicted RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 ABCC2Q92887 1545 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 PVALEFA0A1B0GWK0 134 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 HNRNPCP07910 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 SERPINB4P48594 390 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 DGKHQ86XP1 1220 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 ZNF197O14709 1029 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 ZBTB5O15062 677 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 PRCPP42785 496 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 TBC1D22BQ9NU19 505 aa15.76■□□□□ 0.11
LMX1B-201ENST00000355497 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.76■□□□□ 0.11
LMX1B-201ENST00000355497 PZPP20742 1482 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 A0A1B0GW55 424 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 RAD17O75943 681 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 FTLP02792 175 aaPredicted RBP15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DUX4L2P0CJ85 424 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DUX4L3P0CJ86 424 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DUX4L4P0CJ87 422 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DUX4L5P0CJ88 424 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DUX4L6P0CJ89 424 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DUX4L7P0CJ90 424 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 VCAM1P19320 739 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 PGM1P36871 562 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 ABCE1P61221 599 aaKnown RBP15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DHX34Q14147 1143 aaKnown RBP15.75■□□□□ 0.11
LMX1B-201ENST00000355497 KNOP1Q1ED39 458 aaKnown RBP15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DUX4Q9UBX2 424 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 ZBTB1Q9Y2K1 713 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 ESYT3A0FGR9 886 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DENND3A2RUS2 1198 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 ANGPT2O15123 496 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 SLC9A5Q14940 896 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 CYTH1Q15438 398 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 PPP1R18Q6NYC8 613 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 SH3TC2Q8TF17 1288 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 PHF21AQ96BD5 680 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 ASAP1Q9ULH1 1129 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 STK36Q9NRP7 1315 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 APOL1O14791 398 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 ALDH18A1P54886 795 aaKnown RBP15.75■□□□□ 0.11
LMX1B-201ENST00000355497 DRAP1Q14919 205 aaPredicted RBP15.75■□□□□ 0.11
LMX1B-201ENST00000355497 FAM83BQ5T0W9 1011 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 THEMIS2Q5TEJ8 643 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 TWF2Q6IBS0 349 aaKnown RBP15.75■□□□□ 0.11
LMX1B-201ENST00000355497 TTC39CQ8N584 583 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 C2orf40Q9H1Z8 148 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 AIPL1Q9NZN9 384 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 TAP1Q03518 808 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 PFKFB3Q16875 520 aaPredicted RBP15.75■□□□□ 0.11
LMX1B-201ENST00000355497 TRIM72Q6ZMU5 477 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 KIF2CQ99661 725 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 ZNF302Q9NR11 478 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 MAD2L2Q9UI95 211 aa15.75■□□□□ 0.11
LMX1B-201ENST00000355497 ADORA2BP29275 332 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 TRADDQ15628 312 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 PLEKHM3Q6ZWE6 761 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 OR6P1Q8NGX9 317 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 KLC4Q9NSK0 619 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 ABCB11O95342 1321 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 USP17L5A8MUK1 530 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 RAB42Q8N4Z0 105 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 FEM1BQ9UK73 627 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 PRR23D1E9PI22 279 aaPredicted RBP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 PRR23D2P0DMB1 279 aaPredicted RBP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 UBE3AQ05086 875 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 ACCSLQ4AC99 568 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 AARS2Q5JTZ9 985 aaKnown RBP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 PPHLN1Q8NEY8 458 aaKnown RBP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 AGR3Q8TD06 166 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 DHX35Q9H5Z1 703 aaKnown RBP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 FBXL5Q9UKA1 691 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 DFFAO00273 331 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 MAP4P27816 1152 aaKnown RBP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 BTNL9Q6UXG8 535 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 PLD3Q8IV08 490 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 ASCC2Q9H1I8 757 aaPredicted RBP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 UNC45AQ9H3U1 944 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.74■□□□□ 0.11
LMX1B-201ENST00000355497 ARIH2O95376 493 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 KRT76Q01546 638 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 KRT17Q04695 432 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 SPATA21Q7Z572 469 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 NLRP10Q86W26 655 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 PARVAQ9NVD7 372 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 SELENONQ9NZV5 590 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 LZTS1Q9Y250 596 aa15.74■□□□□ 0.11
LMX1B-201ENST00000355497 PFASO15067 1338 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 RUBCNQ92622 972 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 PLEKHF1Q96S99 279 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 GOLPH3LQ9H4A5 285 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 SYTL2Q9HCH5 934 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 SPDYE5A6NIY4 337 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 C16orf96A6NNT2 1141 aa15.73■□□□□ 0.11
LMX1B-201ENST00000355497 RASGRF1Q13972 1273 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms