RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SLC10A4Q96EP9 437 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 HGH1Q9BTY7 390 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 EHD1Q9H4M9 534 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 DDX20Q9UHI6 824 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 POLIQ9UNA4 740 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 UBTFL1P0CB47 393 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 GPSM2P81274 684 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RPS6KA2Q15349 733 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ARL13BQ3SXY8 428 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 FAM83BQ5T0W9 1011 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RBM15BQ8NDT2 890 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 PNPT1Q8TCS8 783 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RAPGEF5Q92565 580 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 GON7Q9BXV9 100 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SAMSN1Q9NSI8 373 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 STOX2Q9P2F5 926 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 PHF11Q9UIL8 331 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF318Q5VUA4 2279 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 EIF4E1BA6NMX2 242 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RNF103O00237 685 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC22O60826 627 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TCEA3O75764 348 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RORAP35398 523 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 FGD6Q6ZV73 1430 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RAPH1Q70E73 1250 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 MMGT1Q8N4V1 131 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM31Q9BZY9 425 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 M0R3G1 203 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF862O60290 1169 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 PRKG1Q13976 671 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 FERMT2Q96AC1 680 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 PBKQ96KB5 322 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 OR51B5Q9H339 312 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SLC40A1Q9NP59 571 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 METTL5Q9NRN9 209 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 BIN1O00499 593 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 USP14P54578 494 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 DRG2P55039 364 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF589Q86UQ0 364 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 BCL7BQ9BQE9 202 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 WDR12Q9GZL7 423 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ELAC1Q9H777 363 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 AASDHPPTQ9NRN7 309 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RUVBL2Q9Y230 463 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ITIH6Q6UXX5 1313 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 CLPTM1O96005 669 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 GEMIN4P57678 1058 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 KCNT1Q5JUK3 1230 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 KANK2Q63ZY3 851 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SPIRE2Q8WWL2 714 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 MNTQ99583 582 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 DNAJC5Q9H3Z4 198 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 EPB41L5Q9HCM4 733 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 OLFML3Q9NRN5 406 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 FAM86C1Q9NVL1 165 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ENC1O14682 589 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 CRCPO75575 148 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 UQCRBP14927 111 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SLC9C1Q4G0N8 1177 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 S100ZQ8WXG8 99 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 DEPDC7Q96QD5 511 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 LRRC2Q9BYS8 371 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RXFP1Q9HBX9 757 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 METTL21EPA6NDL7 271 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 JAK1P23458 1154 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 HARS2P49590 506 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TMEM154Q6P9G4 183 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 FOXR2Q6PJQ5 311 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RASGRP2Q7LDG7 609 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TCAIMQ8N3R3 496 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF420Q8TAQ5 688 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TMEM245Q9H330 911 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SLC5A4Q9NY91 659 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 STK39Q9UEW8 545 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 EXTL3O43909 919 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ANO6Q4KMQ2 910 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TTC25Q96NG3 672 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 MAP1BP46821 2468 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TUBAL3A6NHL2 446 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SCTRP47872 440 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 VCPP55072 806 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 PUDPQ08623 228 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 MYBPC3Q14896 1274 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 LMBRD2Q68DH5 695 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ERAP2Q6P179 960 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 RIBC1Q8N443 379 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 DACH2Q96NX9 599 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SPATA16Q9BXB7 569 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TTC21BQ7Z4L5 1316 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ISPDA4D126 451 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TRPC5OSA6NMA1 111 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 ECE2O60344 883 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 XRCC5P13010 732 aaKnown RBP3.98□□□□□ -1.77
SYNE2-202ENST00000344113 BFSP2Q13515 415 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 SLC10A5Q5PT55 438 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 IDO2Q6ZQW0 420 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 MYO1HQ8N1T3 1032 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 TTC17Q96AE7 1141 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 MSANTD3Q96H12 275 aa3.98□□□□□ -1.77
SYNE2-202ENST00000344113 DSCC1Q9BVC3 393 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms