RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PARD3BQ8TEW8 1205 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 NLRP4Q96MN2 994 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 FAM213AQ9BRX8 229 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 MAGEB2O15479 319 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 PRKCZQ05513 592 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 DNTTIP2Q5QJE6 756 aaKnown RBP23.07■■□□□ 1.28
VRK2-201ENST00000340157 GJB7Q6PEY0 223 aa23.07■■□□□ 1.28
VRK2-201ENST00000340157 CRELD2Q6UXH1 353 aaPredicted RBP23.07■■□□□ 1.28
VRK2-201ENST00000340157 NHEJ1Q9H9Q4 299 aaPredicted RBP23.07■■□□□ 1.28
VRK2-201ENST00000340157 ZNHIT6Q9NWK9 470 aaKnown RBP23.07■■□□□ 1.28
VRK2-201ENST00000340157 TRIP12Q14669 1992 aaPredicted RBP23.06■■□□□ 1.28
VRK2-201ENST00000340157 A0A0B4J269 797 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 CCP110O43303 1012 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 ZSCAN12O43309 604 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 LRRN2O75325 713 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 NDUFA10O95299 355 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 CCDC175P0C221 793 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 TNNT1P13805 278 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 GCLMP48507 274 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 APLP1P51693 650 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 HGSNATQ68CP4 663 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 PPP1R13LQ8WUF5 828 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 MINDY3Q9H8M7 445 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 IFT122Q9HBG6 1241 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 FBXL5Q9UKA1 691 aa23.06■■□□□ 1.28
VRK2-201ENST00000340157 EPN1Q9Y6I3 576 aaPredicted RBP23.06■■□□□ 1.28
VRK2-201ENST00000340157 LRRIQ3A6PVS8 624 aaPredicted RBP23.05■■□□□ 1.28
VRK2-201ENST00000340157 EXTL3O43909 919 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 CYBAP13498 195 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 WNT7BP56706 349 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 NLRP11P59045 1033 aaKnown RBP23.05■■□□□ 1.28
VRK2-201ENST00000340157 PTENP60484 403 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 BEX3Q00994 111 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 PTPN14Q15678 1187 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 ZBTB41Q5SVQ8 909 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 ZPBP2Q6X784 338 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 ZBTB8OSQ8IWT0 167 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 CCDC127Q96BQ5 260 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 POP1Q99575 1024 aaKnown RBP23.05■■□□□ 1.28
VRK2-201ENST00000340157 TMEM117Q9H0C3 514 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 INTS2Q9H0H0 1204 aaKnown RBP23.05■■□□□ 1.28
VRK2-201ENST00000340157 C2orf40Q9H1Z8 148 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 TOPORSQ9NS56 1045 aaPredicted RBP23.05■■□□□ 1.28
VRK2-201ENST00000340157 ANKFY1Q9P2R3 1169 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 AGO2Q9UKV8 859 aaKnown RBP23.05■■□□□ 1.28
VRK2-201ENST00000340157 Q9Y3F1 56 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 ABLIM1O14639 778 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 PRKCBP05771 671 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 IQCF3P0C7M6 154 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 MBTD1Q05BQ5 628 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 EPC2Q52LR7 807 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 TMC2Q8TDI7 906 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 SYN2Q92777 582 aaPredicted RBP23.05■■□□□ 1.28
VRK2-201ENST00000340157 FZD8Q9H461 694 aa23.05■■□□□ 1.28
VRK2-201ENST00000340157 ASAP2O43150 1006 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 JAM2P57087 298 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 TRIM32Q13049 653 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 TFDP1Q14186 410 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 MAPK6Q16659 721 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 KIAA0753Q2KHM9 967 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 SLFN12LQ6IEE8 588 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 IQCEQ6IPM2 695 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 ZNF784Q8NCA9 323 aaPredicted RBP23.04■■□□□ 1.28
VRK2-201ENST00000340157 LMBR1Q8WVP7 490 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 ACO2Q99798 780 aaKnown RBP23.04■■□□□ 1.28
VRK2-201ENST00000340157 MRPL4Q9BYD3 311 aaKnown RBP23.04■■□□□ 1.28
VRK2-201ENST00000340157 SETD4Q9NVD3 440 aa23.04■■□□□ 1.28
VRK2-201ENST00000340157 PMM2O15305 246 aa23.03■■□□□ 1.28
VRK2-201ENST00000340157 FAM189A1O60320 539 aa23.03■■□□□ 1.28
VRK2-201ENST00000340157 VTNP04004 478 aa23.03■■□□□ 1.28
VRK2-201ENST00000340157 AKR1A1P14550 325 aa23.03■■□□□ 1.28
VRK2-201ENST00000340157 ACOT2P49753 483 aa23.03■■□□□ 1.28
VRK2-201ENST00000340157 HIC1Q14526 733 aa23.03■■□□□ 1.28
VRK2-201ENST00000340157 REM2Q8IYK8 340 aaPredicted RBP23.03■■□□□ 1.28
VRK2-201ENST00000340157 PPP1R16BQ96T49 567 aa23.03■■□□□ 1.28
VRK2-201ENST00000340157 NFKBIZQ9BYH8 718 aa23.03■■□□□ 1.28
VRK2-201ENST00000340157 MYADML2A6NDP7 307 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 ZNF233A6NK53 670 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 HAS3O00219 553 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 KIAA0391O15091 583 aaKnown RBP23.02■■□□□ 1.28
VRK2-201ENST00000340157 P4HA2O15460 535 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 SMIM10L2AP0DMW4 78 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 SMIM10L2BP0DMW5 78 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 SP3Q02447 781 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 SFMBT2Q5VUG0 894 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 FAM84AQ96KN4 292 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 MSTO1Q9BUK6 570 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 CFHR5Q9BXR6 569 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 NUCKS1Q9H1E3 243 aaKnown RBP23.02■■□□□ 1.28
VRK2-201ENST00000340157 AIPL1Q9NZN9 384 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 ANK1P16157 1881 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 ZNF263O14978 683 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 B4GALT5O43286 388 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 N4BP1O75113 896 aaKnown RBP23.02■■□□□ 1.28
VRK2-201ENST00000340157 TOM1L1O75674 476 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 ABL1P00519 1130 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 EIF4A3P38919 411 aaKnown RBP23.02■■□□□ 1.28
VRK2-201ENST00000340157 CPT1AP50416 773 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 MXI1P50539 228 aa23.02■■□□□ 1.28
VRK2-201ENST00000340157 POU5F1BQ06416 359 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms