RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PIH1D3Q9NQM4 214 aaKnown RBP13.86□□□□□ -0.19
HLCS-201ENST00000336648 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 TRAF3IP3Q9Y228 551 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 BCAR1P56945 870 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 STILQ15468 1287 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 ZNF568Q3ZCX4 644 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 TMEM270Q6UE05 265 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 NLRP14Q86W24 1093 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 ALKBH8Q96BT7 664 aaKnown RBP13.86□□□□□ -0.19
HLCS-201ENST00000336648 EPAS1Q99814 870 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 INTS2Q9H0H0 1204 aaKnown RBP13.86□□□□□ -0.19
HLCS-201ENST00000336648 DBNDD1Q9H9R9 158 aa13.86□□□□□ -0.19
HLCS-201ENST00000336648 CDH2P19022 906 aaPredicted RBP13.85□□□□□ -0.19
HLCS-201ENST00000336648 AP1B1Q10567 949 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 Q3C1V9 767 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 BEND6Q5SZJ8 279 aaPredicted RBP13.85□□□□□ -0.19
HLCS-201ENST00000336648 RCSD1Q6JBY9 416 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 RASSF3Q86WH2 238 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 DYNLL2Q96FJ2 89 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 PCDHGB4Q9UN71 923 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 SMG5Q9UPR3 1016 aaKnown RBP13.85□□□□□ -0.19
HLCS-201ENST00000336648 GDAQ9Y2T3 454 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 THAP11Q96EK4 314 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 MRPL4Q9BYD3 311 aaKnown RBP13.85□□□□□ -0.19
HLCS-201ENST00000336648 VCAM1P19320 739 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 GGCXP38435 758 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 RAB14P61106 215 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 GRM4Q14833 912 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 PPM1NQ8N819 430 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 TUBGCP3Q96CW5 907 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 ZNF560Q96MR9 790 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 FOXP3Q9BZS1 431 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 SMYD3Q9H7B4 428 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 OLFML3Q9NRN5 406 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 ZHX2Q9Y6X8 837 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 HDLBPQ00341 1268 aaKnown RBP13.85□□□□□ -0.19
HLCS-201ENST00000336648 INPP5AQ14642 412 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 FRMD5Q7Z6J6 570 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 ZFYVE19Q96K21 471 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 PARVAQ9NVD7 372 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 EHD2Q9NZN4 543 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 ZFYVE16Q7Z3T8 1539 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 SMAPO00193 183 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 QARSP47897 775 aaKnown RBP13.85□□□□□ -0.19
HLCS-201ENST00000336648 MXD4Q14582 209 aaPredicted RBP13.85□□□□□ -0.19
HLCS-201ENST00000336648 CATSPER3Q86XQ3 398 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 MASTLQ96GX5 879 aa13.85□□□□□ -0.19
HLCS-201ENST00000336648 S100A5P33763 92 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 HADHAP40939 763 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 FOXD4Q12950 439 aaPredicted RBP13.84□□□□□ -0.19
HLCS-201ENST00000336648 FAM47EQ6ZV65 393 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 LUZP2Q86TE4 346 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 TAGAPQ8N103 731 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 TBC1D19Q8N5T2 526 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 PBXIP1Q96AQ6 731 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 RMDN3Q96TC7 470 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
HLCS-201ENST00000336648 GNA15P30679 374 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 DEFA1P59665 94 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 DEFA3P59666 94 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 PRAMEP78395 509 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 CDC42EP1Q00587 391 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 CCNYL1Q8N7R7 359 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 SLC10A4Q96EP9 437 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 ZNF341Q9BYN7 854 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 SLC16A3O15427 465 aaKnown RBP13.84□□□□□ -0.19
HLCS-201ENST00000336648 SUPT3HO75486 399 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 CYP2E1P05181 493 aaPredicted RBP13.84□□□□□ -0.19
HLCS-201ENST00000336648 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
HLCS-201ENST00000336648 USP11P51784 963 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 HORMAD1Q86X24 394 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 ASAP3Q8TDY4 903 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 SCFD1Q8WVM8 642 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 TEKT4Q8WW24 435 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 CNBD2Q96M20 576 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 C11orf70Q9BRQ4 267 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 C10orf88Q9H8K7 445 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 ZNF302Q9NR11 478 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 ADA2Q9NZK5 511 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 SLC9A2Q9UBY0 812 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 GOLGA8TH3BQL2 631 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 M0QYV0 167 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 PLEKHA8P1O95397 391 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 PSMC5P62195 406 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 KCNB1Q14721 858 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 LBRQ14739 615 aaKnown RBP13.84□□□□□ -0.19
HLCS-201ENST00000336648 LLGL1Q15334 1064 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 TBC1D10BQ4KMP7 808 aaPredicted RBP13.84□□□□□ -0.19
HLCS-201ENST00000336648 SLC27A3Q5K4L6 730 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 TLK2Q86UE8 772 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 SP110Q9HB58 689 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 HEY1Q9Y5J3 304 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 C16orf96A6NNT2 1141 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 PI4K2BG5E9Z4 385 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 DIAPH2O60879 1101 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 HSPA9P38646 679 aaKnown RBP13.84□□□□□ -0.19
HLCS-201ENST00000336648 GCLMP48507 274 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 TJAP1Q5JTD0 557 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 KCNV1Q6PIU1 500 aa13.84□□□□□ -0.19
HLCS-201ENST00000336648 ANKS3Q6ZW76 656 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms