RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 RILPQ96NA2 401 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 GBP5Q96PP8 586 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 DDX23Q9BUQ8 820 aaKnown RBP13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 PLS3P13797 630 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 PRKCIP41743 596 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 RINT1Q6NUQ1 792 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 SLC13A5Q86YT5 568 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 SCN11AQ9UI33 1791 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 MYH10P35580 1976 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 EPHA7Q15375 998 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 IZUMO3Q5VZ72 239 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 C9orf72Q96LT7 481 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
DNMT3A-202ENST00000321117 CCDC160A6NGH7 325 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 RASSF10A6NK89 507 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 EIF4E1BA6NMX2 242 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 UBOX5O94941 541 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 STAT4Q14765 748 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 FOXR2Q6PJQ5 311 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 YIPF3Q9GZM5 350 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 SERPINA10Q9UK55 444 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 DISP2A7MBM2 1401 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 BTNL10A8MVZ5 291 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 TCP10L2B9ZVM9 353 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 SLC16A4O15374 487 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 ASAP2O43150 1006 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 SPAG7O75391 227 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 ATP6V1G2O95670 118 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 NQO1P15559 274 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 CRKP46108 304 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 COPS2P61201 443 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 RBBP5Q15291 538 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 KRT39Q6A163 491 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 CENPUQ71F23 418 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 CYFIP1Q7L576 1253 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 PDCD7Q8N8D1 485 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 C1orf131Q8NDD1 294 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 ATL2Q8NHH9 583 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 CFAP61Q8NHU2 1237 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 AGPAT3Q9NRZ7 376 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 TTC7AQ9ULT0 858 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 MYH2Q9UKX2 1941 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 NOL4O94818 638 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 MSH2P43246 934 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 IFI35P80217 286 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 CRYMQ14894 314 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 SLC30A5Q8TAD4 765 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 HAS1Q92839 578 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 PGM2Q96G03 612 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 TRAIPQ9BWF2 469 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 CASZ1Q86V15 1759 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 IPO5O00410 1097 aaKnown RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 RAD23BP54727 409 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 RASA3Q14644 834 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 PREPLQ4J6C6 727 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 IRF2BP2Q7Z5L9 587 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 TBC1D16Q8TBP0 767 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 SERPINB12Q96P63 405 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 POLR3CQ9BUI4 534 aaPredicted RBP13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 ADAM22Q9P0K1 906 aa13.61□□□□□ -0.23
DNMT3A-202ENST00000321117 MSH4O15457 936 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 CASP5P51878 434 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 KCTD19Q17RG1 926 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 HP1BP3Q5SSJ5 553 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 MCF2L2Q86YR7 1114 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 ARMC2Q8NEN0 867 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 FERMT1Q9BQL6 677 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 TXNDC16Q9P2K2 825 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 ANP32DO95626 131 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 BAG2O95816 211 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 INHBAP08476 426 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 SKIP12755 728 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 FNTAP49354 379 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 HADHQ16836 314 aaKnown RBP13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 CEP55Q53EZ4 464 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 MOXD1Q6UVY6 613 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 DEPTORQ8TB45 409 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 NUDCD1Q96RS6 583 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 C11orf70Q9BRQ4 267 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 ATP6V0A4Q9HBG4 840 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 SCP2P22307 547 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 DDR1Q08345 913 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 ERMARDQ5T6L9 678 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 HAUS6Q7Z4H7 955 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 PYROXD1Q8WU10 500 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 TTC25Q96NG3 672 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 RPS6KC1Q96S38 1066 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 KCNG1Q9UIX4 513 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 ZFP69BQ9UJL9 534 aa13.6□□□□□ -0.23
DNMT3A-202ENST00000321117 PDHA1P08559 390 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 YWHAGP61981 247 aaKnown RBP eCLIP13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 QPCTQ16769 361 aa13.59□□□□□ -0.23
DNMT3A-202ENST00000321117 SYDE1Q6ZW31 735 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms