RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PRIMPOLQ96LW4 560 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 PNMA5Q96PV4 448 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 CDCA3Q99618 268 aaPredicted RBP21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 EPHX3Q9H6B9 360 aa21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 PUF60Q9UHX1 559 aaKnown RBP21.95■■□□□ 1.1
PDZRN3-202ENST00000308537 NAMPTP43490 491 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 NDUFV1P49821 464 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 KRT17Q04695 432 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 MAPK7Q13164 816 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 LARP1BQ659C4 914 aaKnown RBP21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 DTHD1Q6ZMT9 781 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 COLGALT2Q8IYK4 626 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 GJD3Q8N144 294 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 ZFP42Q96MM3 310 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 GAD1Q99259 594 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 KIFC3Q9BVG8 833 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 ENTPD7Q9NQZ7 604 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 MARCH5Q9NX47 278 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 PRKAG3Q9UGI9 489 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 USP20Q9Y2K6 914 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 IRAK3Q9Y616 596 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 TRIOO75962 3097 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 TRIP11Q15643 1979 aa21.94■■□□□ 1.1
PDZRN3-202ENST00000308537 ARL5CA6NH57 179 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 H3BQV1 296 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 POMCP01189 267 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 ITGA4P13612 1032 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 MLH1P40692 756 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 SLC27A1Q6PCB7 646 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 DDX53Q86TM3 631 aaKnown RBP21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 LRRC15Q8TF66 581 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 TMEM169Q96HH4 297 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 TMEM175Q9BSA9 504 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 RUSC1Q9BVN2 902 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 GBP3Q9H0R5 595 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 PDZD7Q9H5P4 517 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 C11orf16Q9NQ32 467 aa21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 PRMT7Q9NVM4 692 aaPredicted RBP21.93■■□□□ 1.1
PDZRN3-202ENST00000308537 SYCE2Q6PIF2 218 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 C1orf186Q6ZWK4 172 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 TMC7Q7Z402 723 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 ADHFE1Q8IWW8 467 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 RNF168Q8IYW5 571 aaPredicted RBP21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 VPS52Q8N1B4 723 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 AUTS2Q8WXX7 1259 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 SUSD6Q92537 303 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 RAB34Q9BZG1 259 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 S1PR5Q9H228 398 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 UBN1Q9NPG3 1134 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 KANSL3Q9P2N6 904 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 GIT1Q9Y2X7 761 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 STK24Q9Y6E0 443 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 MYH11P35749 1972 aa21.92■■□□□ 1.1
PDZRN3-202ENST00000308537 ZMYM2Q9UBW7 1377 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 F8W810 466 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 ACKR2O00590 384 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 NRP1O14786 923 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 LILRB3O75022 631 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 NPTXRO95502 500 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 CTSAP10619 480 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 AKAP5P24588 427 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 SCNN1GP51170 649 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 RNASELQ05823 741 aaKnown RBP21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 SMC1AQ14683 1233 aaKnown RBP21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 KRT79Q5XKE5 535 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 EEF1DP3Q658K8 133 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 ARL6IP4Q66PJ3 421 aaKnown RBP21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 RINT1Q6NUQ1 792 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 URGCPQ8TCY9 931 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 C2orf40Q9H1Z8 148 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 CXCL16Q9H2A7 254 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 HCFC2Q9Y5Z7 792 aa21.91■■□□□ 1.1
PDZRN3-202ENST00000308537 CARNS1A5YM72 827 aa21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 CLASP2O75122 1294 aaKnown RBP21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 GRIN1Q05586 938 aa21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 TMEM119Q4V9L6 283 aa21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 TAS1R3Q7RTX0 852 aa21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 ZBTB8OSQ8IWT0 167 aa21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 KIFAP3Q92845 792 aa21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 FAM50BQ9Y247 325 aa21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 USP15Q9Y4E8 981 aaPredicted RBP21.9■■□□□ 1.1
PDZRN3-202ENST00000308537 FSD2A1L4K1 749 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 VWA3AA6NCI4 1184 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 PI4K2BG5E9Z4 385 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 PRKCBP05771 671 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 NCBP1Q09161 790 aaKnown RBP21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 PTPN14Q15678 1187 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 MAPK6Q16659 721 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 NT5DC1Q5TFE4 455 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 ANKRD54Q6NXT1 300 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 APOL6Q9BWW8 343 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 DNM3Q9UQ16 869 aa21.89■■□□□ 1.09
PDZRN3-202ENST00000308537 HIP1RO75146 1068 aa21.88■■□□□ 1.09
PDZRN3-202ENST00000308537 NPTX2P47972 431 aa21.88■■□□□ 1.09
PDZRN3-202ENST00000308537 SLC12A3P55017 1021 aa21.88■■□□□ 1.09
PDZRN3-202ENST00000308537 PPP2R5AQ15172 486 aa21.88■■□□□ 1.09
PDZRN3-202ENST00000308537 NAB2Q15742 525 aa21.88■■□□□ 1.09
PDZRN3-202ENST00000308537 BRAPQ7Z569 592 aa21.88■■□□□ 1.09
PDZRN3-202ENST00000308537 FEZF2Q8TBJ5 459 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms