RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PLA2G6O60733 806 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 MDH1P40925 334 aaKnown RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 FNTAP49354 379 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 MXI1P50539 228 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 PTENP60484 403 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 CETN1Q12798 172 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 ODF2Q5BJF6 829 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 KREMEN1Q96MU8 473 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 CARD9Q9H257 536 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 SNX24Q9Y343 169 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-204ENST00000300862 UBIAD1Q9Y5Z9 338 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 RPTORQ8N122 1335 aa13.91□□□□□ -0.18
HIF3A-204ENST00000300862 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-204ENST00000300862 CCNE2O96020 404 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 MMEP08473 750 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 CHRNB2P17787 502 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 COMTP21964 271 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 ADSSP30520 456 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 PTGISQ16647 500 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 NSMFQ6X4W1 530 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 ZDHHC14Q8IZN3 488 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 EIF1ADQ8N9N8 165 aaKnown RBP13.9□□□□□ -0.18
HIF3A-204ENST00000300862 NEK9Q8TD19 979 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.9□□□□□ -0.18
HIF3A-204ENST00000300862 NOVA2Q9UNW9 492 aaKnown RBP13.9□□□□□ -0.18
HIF3A-204ENST00000300862 TCRBV7S2A1N4TA0A589 114 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 TBC1D12O60347 775 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 EGFRP00533 1210 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 VCAM1P19320 739 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 MNAT1P51948 309 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 PLTPP55058 493 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 GSCP56915 257 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-204ENST00000300862 LRIG3Q6UXM1 1119 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 GPATCH11Q8N954 259 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 EPS8L1Q8TE68 723 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 WNK4Q96J92 1243 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 FMO2Q99518 471 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 EPN3Q9H201 632 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 TTC7AQ9ULT0 858 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-204ENST00000300862 TELO2Q9Y4R8 837 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 CAPN7Q9Y6W3 813 aa13.9□□□□□ -0.18
HIF3A-204ENST00000300862 E7EVH7 732 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 KCNA4P22459 653 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 GPC5P78333 572 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 SP4Q02446 784 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 RASA3Q14644 834 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 KRT71Q3SY84 523 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 UBAP2Q5T6F2 1119 aaKnown RBP13.89□□□□□ -0.19
HIF3A-204ENST00000300862 PCNX4Q63HM2 1172 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 CCDC91Q7Z6B0 441 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 SEC14L1Q92503 715 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 DHX38Q92620 1227 aaKnown RBP13.89□□□□□ -0.19
HIF3A-204ENST00000300862 CNOT8Q9UFF9 292 aaKnown RBP13.89□□□□□ -0.19
HIF3A-204ENST00000300862 PGAP2Q9UHJ9 254 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 TCEAL9Q9UHQ7 104 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 DBR1Q9UK59 544 aaKnown RBP13.89□□□□□ -0.19
HIF3A-204ENST00000300862 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 GOLGA6L10A0A0M3HER8 536 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 PHF20L1A8MW92 1017 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 CLSTN1O94985 981 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 SHBGP04278 402 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 GTF2BQ00403 316 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 SF3B2Q13435 895 aaKnown RBP13.89□□□□□ -0.19
HIF3A-204ENST00000300862 MYBPC2Q14324 1141 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 PGM5Q15124 567 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 SNRNP35Q16560 246 aaKnown RBP13.89□□□□□ -0.19
HIF3A-204ENST00000300862 JAMLQ86YT9 394 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 RHOT2Q8IXI1 618 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 UHMK1Q8TAS1 419 aaKnown RBP13.89□□□□□ -0.19
HIF3A-204ENST00000300862 CCT8L2Q96SF2 557 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 RMDN3Q96TC7 470 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 FAM114A2Q9NRY5 505 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 NOCTQ9UK39 431 aaKnown RBP13.89□□□□□ -0.19
HIF3A-204ENST00000300862 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
HIF3A-204ENST00000300862 MAGOHP61326 146 aaKnown RBP13.88□□□□□ -0.19
HIF3A-204ENST00000300862 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
HIF3A-204ENST00000300862 DUPD1Q68J44 220 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 PHLDB2Q86SQ0 1253 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 MCF2L2Q86YR7 1114 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 PRELID2Q8N945 189 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 ZNF473Q8WTR7 871 aaKnown RBP13.88□□□□□ -0.19
HIF3A-204ENST00000300862 MAGOHBQ96A72 148 aaKnown RBP13.88□□□□□ -0.19
HIF3A-204ENST00000300862 DEFB129Q9H1M3 183 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 SMIM23A6NLE4 172 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 CLGNO14967 610 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 FSBPO95073 299 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 PYGMP11217 842 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 RFX1P22670 979 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 CXCL9Q07325 125 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 IFFO1Q0D2I5 559 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 TTC27Q6P3X3 843 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 FAM83AQ86UY5 434 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 NLRP14Q86W24 1093 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 FAM71AQ8IYT1 594 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 MYCBPAPQ8TBZ2 947 aa13.88□□□□□ -0.19
HIF3A-204ENST00000300862 FBXO25Q8TCJ0 367 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms