RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 SOX5P35711 763 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 RNF25Q96BH1 459 aaPredicted RBP17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 CCSER1Q9C0I3 900 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 AP5M1Q9H0R1 490 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 AGPAT5Q9NUQ2 364 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 LRRIQ1Q96JM4 1722 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 SERPINB4P48594 390 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 KRT17Q04695 432 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 POLD4Q9HCU8 107 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 DEPDC5O75140 1603 aa17.51■□□□□ 0.39
SNAPC4-201ENST00000298532 CALB1P05937 261 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 PCYT1AP49585 367 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 CARSP49589 748 aaKnown RBP17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 FRMD5Q7Z6J6 570 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 PNKPQ96T60 521 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 TRIM9Q9C026 710 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 TRABDQ9H4I3 376 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 INO80B-WBP1J3KQ70 363 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 NVLO15381 856 aaKnown RBP17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 SYDE1Q6ZW31 735 aaPredicted RBP17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 RHOT1Q8IXI2 618 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 C3orf20Q8ND61 904 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 CATSPER1Q8NEC5 780 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 HSPH1Q92598 858 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 INO80BQ9C086 356 aaPredicted RBP17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 ING2Q9H160 280 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 BARHL2Q9NY43 387 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 ZNRF3Q9ULT6 936 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 CRKP46108 304 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 HIC1Q14526 733 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 TMEM259Q4ZIN3 620 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 SLFN12LQ6IEE8 588 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 MIS18BP1Q6P0N0 1132 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 PIGOQ8TEQ8 1089 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 DNAJC9Q8WXX5 260 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 PPP1R18Q6NYC8 613 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 LONP2Q86WA8 852 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 C1orf54Q8WWF1 131 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 VPS39Q96JC1 886 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 C11orf70Q9BRQ4 267 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 L1RE1Q9UN81 338 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 MAGED2Q9UNF1 606 aaPredicted RBP17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 IQSEC2Q5JU85 1478 aa17.5■□□□□ 0.39
SNAPC4-201ENST00000298532 hCG_2014768A0A024R1R8 64 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 SPDYE16A6NNV3 312 aaPredicted RBP17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 CHEK2O96017 543 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 TAC1P20366 129 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 PEX3P56589 373 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 COPS2P61201 443 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 MED21Q13503 144 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 GRM4Q14833 912 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 KDM7AQ6ZMT4 941 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 EXOC8Q8IYI6 725 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 BBS5Q8N3I7 341 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 FBXL13Q8NEE6 735 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 POLR3CQ9BUI4 534 aaPredicted RBP17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 PLA2G12BQ9BX93 195 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 RNF103-CHMP3A0A140T963 221 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 NBPF20Q3BBV1 942 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 TMEM154Q6P9G4 183 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 TMEM179Q6ZVK1 233 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 ELOA2Q8IYF1 753 aaPredicted RBP17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 OR2W6PQ8NHA6 318 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 CEP19Q96LK0 163 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 FAM20AQ96MK3 541 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 ISCUQ9H1K1 167 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 CYP26B1Q9NR63 512 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 GEMIN8Q9NWZ8 242 aaKnown RBP17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 SEL1LQ9UBV2 794 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 POTEB3A0JP26 581 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 POTECB2RU33 542 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 RAD51CO43502 376 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 MYBL1P10243 752 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 KCNA3P22001 575 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 ZNF746Q6NUN9 644 aaPredicted RBP17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 CYB5D1Q6P9G0 228 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 POTEBQ6S5H4 581 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 TRIM51Q9BSJ1 452 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 CYP4F11Q9HBI6 524 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 NOD2Q9HC29 1040 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 RHOBTB3O94955 611 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 MORF4L2Q15014 288 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 ATL2Q8NHH9 583 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 USP32Q8NFA0 1604 aa17.49■□□□□ 0.39
SNAPC4-201ENST00000298532 DNAJC6O75061 913 aa17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 PHF2O75151 1096 aa17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 GUCY1A2P33402 732 aa17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 SLC12A1Q13621 1099 aa17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 SF3B3Q15393 1217 aaKnown RBP17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 MYLK4Q86YV6 388 aaPredicted RBP17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 DHX38Q92620 1227 aaKnown RBP17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 EHD2Q9NZN4 543 aa17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 SUN2Q9UH99 717 aa17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 ZNF711Q9Y462 761 aa17.48■□□□□ 0.39
SNAPC4-201ENST00000298532 SNX5Q9Y5X3 404 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms