RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 DAPK3O43293 454 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 SGPL1O95470 568 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 CNGA1P29973 690 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 HSD17B3P37058 310 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 HADHBP55084 474 aaKnown RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 SOX10P56693 466 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 ZNF211Q13398 564 aaPredicted RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 NBPF12Q5TAG4 269 aaPredicted RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 TTC19Q6DKK2 380 aaPredicted RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 ADAT2Q7Z6V5 191 aaKnown RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 NOP9Q86U38 636 aaKnown RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 MAP4K3Q8IVH8 894 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 ALG3Q92685 438 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 CCDC127Q96BQ5 260 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 KREMEN1Q96MU8 473 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 MOV10L1Q9BXT6 1211 aaKnown RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 ACP6Q9NPH0 428 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 TMOD4Q9NZQ9 345 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 HACL1Q9UJ83 578 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 EXOC7Q9UPT5 735 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 RRP15Q9Y3B9 282 aaKnown RBP10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 PCDHA10Q9Y5I2 948 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 ALG6Q9Y672 507 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 PTPRFP10586 1907 aa10.04□□□□□ -0.8
UBLCP1-201ENST00000296786 RTN2O75298 545 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 CCND2P30279 289 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 GNGT1P63211 74 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 GPC5P78333 572 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 SKOR1P84550 965 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 POU5F1Q01860 360 aaKnown RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 UAP1Q16222 522 aaPredicted RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 SKIDA1Q1XH10 827 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 NLRX1Q86UT6 975 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 SLC47A2Q86VL8 602 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 VSIG10LQ86VR7 867 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 FAM71AQ8IYT1 594 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 PARD3BQ8TEW8 1205 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 BSNDQ8WZ55 320 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 SEC14L1Q92503 715 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 SEMA4DQ92854 862 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 PCDHB18PQ96TA0 734 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 POP1Q99575 1024 aaKnown RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 ERVK-5Q9HDB9 667 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 KMT5AQ9NQR1 393 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 NOCTQ9UK39 431 aaKnown RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 PNMA2Q9UL42 364 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 USP20Q9Y2K6 914 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 PFASO15067 1338 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 EIF3HO15372 352 aaKnown RBP eCLIP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 CYP26A1O43174 497 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 ATMINO43313 823 aaPredicted RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 ZNF862O60290 1169 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 NR3C2P08235 984 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 FDX1P10109 184 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 CHRNB2P17787 502 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 COPB2P35606 906 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 FLT3P36888 993 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 BACE1P56817 501 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 MCCD1P59942 119 aaPredicted RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 PTENP60484 403 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 CEP85LQ5SZL2 805 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 KRT39Q6A163 491 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 SNRNP48Q6IEG0 339 aaKnown RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 C11orf63Q6NUN7 778 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 SLC39A4Q6P5W5 647 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 SHC3Q92529 594 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 ZKSCAN4Q969J2 545 aaPredicted RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 GPRASP2Q96D09 838 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 CEP170P1Q96L14 293 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 NAP1L3Q99457 506 aaPredicted RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 TRIM51Q9BSJ1 452 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 DPH5Q9H2P9 285 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 GABBR1Q9UBS5 961 aa10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 CHORDC1Q9UHD1 332 aaPredicted RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 UTP11Q9Y3A2 253 aaKnown RBP10.03□□□□□ -0.8
UBLCP1-201ENST00000296786 MYO1CO00159 1063 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 NFKBIEO00221 500 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 MMEP08473 750 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 RPS12P25398 132 aaKnown RBP10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 MFAP3P55082 362 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 SF3B2Q13435 895 aaKnown RBP10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 DALRD3Q5D0E6 543 aaKnown RBP10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 AADACL2Q6P093 401 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 KRT35Q92764 455 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 KIFAP3Q92845 792 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 HVCN1Q96D96 273 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 ATP6V1G3Q96LB4 118 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 TMEM8AQ9HCN3 771 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 TOPORSQ9NS56 1045 aaPredicted RBP10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 FZD1Q9UP38 647 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 TELO2Q9Y4R8 837 aa10.02□□□□□ -0.8
UBLCP1-201ENST00000296786 ADGRA3Q8IWK6 1321 aa10.02□□□□□ -0.81
UBLCP1-201ENST00000296786 SYNGAP1Q96PV0 1343 aa10.02□□□□□ -0.81
UBLCP1-201ENST00000296786 GOLGA6L10A0A0M3HER8 536 aa10.02□□□□□ -0.81
UBLCP1-201ENST00000296786 TMEM110-MUSTN1A8MSY1 372 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms