RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 PRAMEF19Q5SWL8 479 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 SFMBT2Q5VUG0 894 aa16.91■□□□□ 0.3
LSM6-201ENST00000296581 SUCLA2Q9P2R7 463 aaPredicted RBP16.91■□□□□ 0.3
LSM6-201ENST00000296581 REXO2Q9Y3B8 237 aaKnown RBP16.91■□□□□ 0.3
LSM6-201ENST00000296581 EIF3CLB5ME19 914 aaKnown RBP16.9■□□□□ 0.3
LSM6-201ENST00000296581 CTIFO43310 598 aaKnown RBP16.9■□□□□ 0.3
LSM6-201ENST00000296581 TOMM70O94826 608 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 CYP2B6P20813 491 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 CTGFP29279 349 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
LSM6-201ENST00000296581 PPP3CAQ08209 521 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 HGSNATQ68CP4 663 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 SLFN12LQ6IEE8 588 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 CYP4F22Q6NT55 531 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 EFCAB12Q6NXP0 572 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 LINC01465Q8N7H1 131 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 TMC2Q8TDI7 906 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 EIF3CQ99613 913 aaKnown RBP16.9■□□□□ 0.3
LSM6-201ENST00000296581 KIAA1586Q9HCI6 787 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 AIPL1Q9NZN9 384 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 DAAM1Q9Y4D1 1078 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 FHOD1Q9Y613 1164 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 ZSWIM8A7E2V4 1837 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 A6NJR5 290 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 H3BRB1 525 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 MAGEB2O15479 319 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 ASAP2O43150 1006 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 ALDH1A1P00352 501 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 DGKDQ16760 1214 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 PARD3BQ8TEW8 1205 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 C2orf40Q9H1Z8 148 aa16.9■□□□□ 0.3
LSM6-201ENST00000296581 TUT1Q9H6E5 874 aaKnown RBP16.9■□□□□ 0.3
LSM6-201ENST00000296581 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
LSM6-201ENST00000296581 SSU72P8A0A1W2PR75 194 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.29
LSM6-201ENST00000296581 EXTL3O43909 919 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 EDN1P05305 212 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 PLEKP08567 350 aaPredicted RBP16.89■□□□□ 0.29
LSM6-201ENST00000296581 CYP2C19P33261 490 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 CYP24A1Q07973 514 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 ZPBP2Q6X784 338 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 LMO3Q8TAP4 145 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 TARS2Q9BW92 718 aaKnown RBP16.89■□□□□ 0.29
LSM6-201ENST00000296581 INTS2Q9H0H0 1204 aaKnown RBP16.89■□□□□ 0.29
LSM6-201ENST00000296581 PAXBP1Q9Y5B6 917 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 MSCO60682 206 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 KLRC1P26715 233 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 JAM2P57087 298 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 KRT83P78385 493 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 TFDP1Q14186 410 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 TERF2Q15554 542 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 ZBTB8OSQ8IWT0 167 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 RNF149Q8NC42 400 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 EHBP1Q8NDI1 1231 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 CCDC42Q96M95 316 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 TSPYL1Q9H0U9 437 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 USP20Q9Y2K6 914 aa16.89■□□□□ 0.29
LSM6-201ENST00000296581 A0A0U1RQJ8 604 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 LCA5LO95447 670 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 SERPING1P05155 500 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 SRGAP2CP0DJJ0 459 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 EIF4A3P38919 411 aaKnown RBP16.88■□□□□ 0.29
LSM6-201ENST00000296581 CLCN3P51790 818 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 NOGQ13253 232 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 RAPGEF1Q13905 1077 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 ASTE1Q2TB18 679 aaPredicted RBP16.88■□□□□ 0.29
LSM6-201ENST00000296581 SLC9C1Q4G0N8 1177 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 EPC2Q52LR7 807 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 IQCEQ6IPM2 695 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 ZNF662Q6ZS27 426 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 RHPN2Q8IUC4 686 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 KIF18AQ8NI77 898 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 ATRIPQ8WXE1 791 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 HAPLN2Q9GZV7 340 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 CALCOCO1Q9P1Z2 691 aa16.88■□□□□ 0.29
LSM6-201ENST00000296581 AJAP1Q9UKB5 411 aaPredicted RBP16.88■□□□□ 0.29
LSM6-201ENST00000296581 AGO2Q9UKV8 859 aaKnown RBP16.88■□□□□ 0.29
LSM6-201ENST00000296581 A0A0B4J269 797 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 ZNF233A6NK53 670 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 LRRIQ3A6PVS8 624 aaPredicted RBP16.87■□□□□ 0.29
LSM6-201ENST00000296581 DYNC1LI2O43237 492 aaPredicted RBP16.87■□□□□ 0.29
LSM6-201ENST00000296581 GTF2H1P32780 548 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 ARHGAP25P42331 645 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 GCLMP48507 274 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 IGBP1P78318 339 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 POU5F1BQ06416 359 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 CETN1Q12798 172 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 USP37Q86T82 979 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 ZBTB10Q96DT7 871 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 FAM213AQ9BRX8 229 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 NFKBIZQ9BYH8 718 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 Q9Y3F1 56 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 KAT6AQ92794 2004 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 MXI1P50539 228 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 FCGRTP55899 365 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 GRM1Q13255 1194 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 MTHFD1LQ6UB35 978 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 SYT10Q6XYQ8 523 aa16.87■□□□□ 0.29
LSM6-201ENST00000296581 TLK2Q86UE8 772 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms