RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 DENND2CQ68D51 928 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 GJA10Q969M2 543 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 TSG101Q99816 390 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 MMTAG2Q9BU76 263 aaKnown RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 PSTPIP2Q9H939 334 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 RAVER2Q9HCJ3 691 aaKnown RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 ARHGEF3Q9NR81 526 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 PAPOLBQ9NRJ5 636 aaKnown RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 USP15Q9Y4E8 981 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-201ENST00000285398 WDR90Q96KV7 1748 aa11.32□□□□□ -0.6
ERCC3-201ENST00000285398 SUN1O94901 812 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 AGTP01019 485 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 POLR2FP61218 127 aaKnown RBP11.31□□□□□ -0.6
ERCC3-201ENST00000285398 BNIP1Q12981 228 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 C6orf118Q5T5N4 469 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 FBXO11Q86XK2 927 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 REXO1Q8N1G1 1221 aaKnown RBP11.31□□□□□ -0.6
ERCC3-201ENST00000285398 RASGEF1CQ8N431 466 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 METTL13Q8N6R0 699 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 NEK9Q8TD19 979 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 OPTNQ96CV9 577 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 PACSIN1Q9BY11 444 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 TXLNGYQ9BZA5 131 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 PABPC3Q9H361 631 aaKnown RBP11.31□□□□□ -0.6
ERCC3-201ENST00000285398 LRRD1A4D1F6 860 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 WFS1O76024 890 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 SMARCA1P28370 1054 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 CTCFP49711 727 aaPredicted RBP11.31□□□□□ -0.6
ERCC3-201ENST00000285398 ADCY7P51828 1080 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 UBXN2AP68543 259 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 ROR2Q01974 943 aaKnown RBP11.31□□□□□ -0.6
ERCC3-201ENST00000285398 RAPGEF1Q13905 1077 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 LETM2Q2VYF4 491 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 CWF19L1Q69YN2 538 aaKnown RBP11.31□□□□□ -0.6
ERCC3-201ENST00000285398 GADL1Q6ZQY3 521 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 ANKRD13AQ8IZ07 590 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 PRCCQ92733 491 aaPredicted RBP11.31□□□□□ -0.6
ERCC3-201ENST00000285398 ITFG2Q969R8 447 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 AMNQ9BXJ7 453 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 DPH5Q9H2P9 285 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 RIC8AQ9NPQ8 531 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 AIPL1Q9NZN9 384 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 DNAH12Q6ZR08 3092 aa11.31□□□□□ -0.6
ERCC3-201ENST00000285398 MYMKA6NI61 221 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 HIP1RO75146 1068 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 SMIM24O75264 130 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-201ENST00000285398 CFBP00751 764 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 KRT16P08779 473 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 GBP1P32455 592 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 GJA5P36382 358 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 PMS2P54278 862 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 SF3A3Q12874 501 aaKnown RBP eCLIP11.3□□□□□ -0.63e-11■■□□□ 13.1
ERCC3-201ENST00000285398 ASIC2Q16515 512 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 PPP2R5EQ16537 467 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 BTNL9Q6UXG8 535 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 SV2BQ7L1I2 683 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 TAOK1Q7L7X3 1001 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 LMNTD2Q8IXW0 634 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 CALML4Q96GE6 196 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 AS3MTQ9HBK9 375 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 STK38LQ9Y2H1 464 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 HTTP42858 3142 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 TLDC2A0PJX2 215 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 O00370 1275 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
ERCC3-201ENST00000285398 ZBTB48P10074 688 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-201ENST00000285398 ABL2P42684 1182 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 MRPS35P82673 323 aaKnown RBP11.3□□□□□ -0.6
ERCC3-201ENST00000285398 ARID5AQ03989 594 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 SLC5A9Q2M3M2 681 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 PEX26Q7Z412 305 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 SYCE1Q8N0S2 351 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 PROCA1Q8NCQ7 364 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-201ENST00000285398 CHURC1Q8WUH1 139 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 FAM167BQ9BTA0 163 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 LSM14BQ9BX40 385 aaKnown RBP11.3□□□□□ -0.6
ERCC3-201ENST00000285398 TRIM7Q9C029 511 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 ADAM22Q9P0K1 906 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
ERCC3-201ENST00000285398 E7ENQ6 273 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 OAS1P00973 400 aaKnown RBP11.29□□□□□ -0.6
ERCC3-201ENST00000285398 GNA11P29992 359 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 LMNB2Q03252 620 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 PLS1Q14651 629 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 CST9Q5W186 159 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 LPAR1Q92633 364 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 RAB3IPQ96QF0 476 aaPredicted RBP11.29□□□□□ -0.6
ERCC3-201ENST00000285398 LRRC4CQ9HCJ2 640 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 BLOC1S4Q9NUP1 217 aa11.29□□□□□ -0.6
ERCC3-201ENST00000285398 SUCLA2Q9P2R7 463 aaPredicted RBP11.29□□□□□ -0.6
ERCC3-201ENST00000285398 FEM1BQ9UK73 627 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms