RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 LMO3Q8TAP4 145 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 ZBTB10Q96DT7 871 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 HAPLN2Q9GZV7 340 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 AIPL1Q9NZN9 384 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 USP20Q9Y2K6 914 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 ZSWIM8A7E2V4 1837 aa17.81■□□□□ 0.44
TPM1-201ENST00000267996 KIF2AO00139 706 aaPredicted RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 IGBP1P78318 339 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 PPFIA1Q13136 1202 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 GRIK4Q16099 956 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 MARCH8Q5T0T0 291 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 MTHFD1LQ6UB35 978 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 IFNLR1Q8IU57 520 aaPredicted RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 METTL13Q8N6R0 699 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 TRPV1Q8NER1 839 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 KAT2BQ92831 832 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 MRPL4Q9BYD3 311 aaKnown RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 FZD8Q9H461 694 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 NHEJ1Q9H9Q4 299 aaPredicted RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 ARHGAP20Q9P2F6 1191 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 GABRQQ9UN88 632 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 DAAM1Q9Y4D1 1078 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 RRN3P2A6NIE6 340 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 ZNF233A6NK53 670 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 TUBB4AP04350 444 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 GJB1P08034 283 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 GTF2H1P32780 548 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 APLP1P51693 650 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 MAPK6Q16659 721 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 DNTTIP2Q5QJE6 756 aaKnown RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 HGSNATQ68CP4 663 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 LENG1Q96BZ8 264 aaPredicted RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 INTS2Q9H0H0 1204 aaKnown RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 AGO2Q9UKV8 859 aaKnown RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 REXO2Q9Y3B8 237 aaKnown RBP17.8■□□□□ 0.44
TPM1-201ENST00000267996 FHOD1Q9Y613 1164 aa17.8■□□□□ 0.44
TPM1-201ENST00000267996 EIF3CLB5ME19 914 aaKnown RBP17.79■□□□□ 0.44
TPM1-201ENST00000267996 HAS3O00219 553 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 PRKCBP05771 671 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 CYLC1P35663 651 aaPredicted RBP17.79■□□□□ 0.44
TPM1-201ENST00000267996 FLT3LGP49771 235 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 CPT1AP50416 773 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 JAM2P57087 298 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 CLDN10P78369 228 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
TPM1-201ENST00000267996 EPC2Q52LR7 807 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 SFMBT2Q5VUG0 894 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 CRELD2Q6UXH1 353 aaPredicted RBP17.79■□□□□ 0.44
TPM1-201ENST00000267996 USP37Q86T82 979 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 EHBP1Q8NDI1 1231 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 ACRBPQ8NEB7 543 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 EIF3CQ99613 913 aaKnown RBP17.79■□□□□ 0.44
TPM1-201ENST00000267996 ACO2Q99798 780 aaKnown RBP17.79■□□□□ 0.44
TPM1-201ENST00000267996 FAM213AQ9BRX8 229 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 TMEM117Q9H0C3 514 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 AP5M1Q9H0R1 490 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 COQ4Q9Y3A0 265 aa17.79■□□□□ 0.44
TPM1-201ENST00000267996 SSU72P8A0A1W2PR75 194 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 TTLL13PA6NNM8 815 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 LRRIQ3A6PVS8 624 aaPredicted RBP17.78■□□□□ 0.44
TPM1-201ENST00000267996 ACKR2O00590 384 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 ABLIM1O14639 778 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 TOM1L1O75674 476 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 LDHAP00338 332 aaKnown RBP17.78■□□□□ 0.44
TPM1-201ENST00000267996 CYBAP13498 195 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 AKR1A1P14550 325 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 TMOD1P28289 359 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 GCLMP48507 274 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 PSMD6Q15008 389 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 MFSD14CQ5VZR4 134 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 TRIB2Q92519 343 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 NLRP4Q96MN2 994 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 IFT122Q9HBG6 1241 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 AJAP1Q9UKB5 411 aaPredicted RBP17.78■□□□□ 0.44
TPM1-201ENST00000267996 KAT6AQ92794 2004 aa17.78■□□□□ 0.44
TPM1-201ENST00000267996 CASP8AP2Q9UKL3 1982 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 DUSP11O75319 330 aaKnown RBP17.77■□□□□ 0.44
TPM1-201ENST00000267996 LCA5LO95447 670 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 SERPING1P05155 500 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 PLEKP08567 350 aaPredicted RBP17.77■□□□□ 0.44
TPM1-201ENST00000267996 PROZP22891 400 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 MXI1P50539 228 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 NLRP11P59045 1033 aaKnown RBP17.77■□□□□ 0.44
TPM1-201ENST00000267996 CAP1Q01518 475 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 SP3Q02447 781 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 MBTD1Q05BQ5 628 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 CETN1Q12798 172 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 FAM187BQ17R55 369 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 ASTE1Q2TB18 679 aaPredicted RBP17.77■□□□□ 0.44
TPM1-201ENST00000267996 IQCEQ6IPM2 695 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 TSHZ1Q6ZSZ6 1077 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 CCDC127Q96BQ5 260 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 MSTO1Q9BUK6 570 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.44
TPM1-201ENST00000267996 FAM189A1O60320 539 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 TBC1D8O95759 1140 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 RFX1P22670 979 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 PHKA2P46019 1235 aa17.77■□□□□ 0.43
TPM1-201ENST00000267996 ETF1P62495 437 aaKnown RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms