RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PYROXD1Q8WU10 500 aa4.93□□□□□ -1.62
VPS13C-201ENST00000249837 PAGR1Q9BTK6 254 aa4.93□□□□□ -1.62
VPS13C-201ENST00000249837 PODXLO00592 558 aa4.93□□□□□ -1.62
VPS13C-201ENST00000249837 PHLDB3Q6NSJ2 640 aa4.93□□□□□ -1.62
VPS13C-201ENST00000249837 DAGLBQ8NCG7 672 aa4.93□□□□□ -1.62
VPS13C-201ENST00000249837 TRPC6Q9Y210 931 aa4.93□□□□□ -1.62
VPS13C-201ENST00000249837 MAD1L1Q9Y6D9 718 aa4.93□□□□□ -1.62
VPS13C-201ENST00000249837 F5H423 210 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 STK10O94804 968 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PSMC4P43686 418 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 LMNB2Q03252 620 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 KRT17Q04695 432 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 AP3B2Q13367 1082 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 BYSLQ13895 437 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 NXNQ6DKJ4 435 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ERICH1Q86X53 443 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CYP2W1Q8TAV3 490 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CFAP57Q96MR6 1250 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 AGPAT3Q9NRZ7 376 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 DIS3Q9Y2L1 958 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ZNF263O14978 683 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PHF2O75151 1096 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 QARSP47897 775 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 NT5C2P49902 561 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 BASP1P80723 227 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ZNF844Q08AG5 666 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 DHX34Q14147 1143 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 EDRF1Q3B7T1 1238 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 NBPF9Q3BBW0 867 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SLC10A5Q5PT55 438 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 POLR3FQ9H1D9 316 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SEL1LQ9UBV2 794 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ARL1P40616 181 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 GIT2Q14161 759 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CEP55Q53EZ4 464 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PRR5LQ6MZQ0 368 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MSTO1Q9BUK6 570 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 THAP2Q9H0W7 228 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 WNT8AQ9H1J5 351 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 IFT122Q9HBG6 1241 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ETNK1Q9HBU6 452 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 OSGEPQ9NPF4 335 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 INO80B-WBP1J3KQ70 363 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 K7ERI5 159 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 LUC7L3O95232 432 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CALCAP01258 141 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 TMEM191BP0C7N4 346 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SLC29A2Q14542 456 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 HADHQ16836 314 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MIIPQ5JXC2 388 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SPATA21Q7Z572 469 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 FAM160B2Q86V87 743 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 C18orf8Q96DM3 657 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MPHOSPH6Q99547 160 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 FERMT1Q9BQL6 677 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 FAM129AQ9BZQ8 928 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 INO80BQ9C086 356 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MRPL47Q9HD33 250 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 KCNG1Q9UIX4 513 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 RNF8O76064 485 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PSMC1P62191 440 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 FUT2Q10981 343 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 RNF34Q969K3 372 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 APOL6Q9BWW8 343 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 HSPBP1Q9NZL4 362 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MYO3BQ8WXR4 1341 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 CCDC195A0A1B0GUA6 201 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 RAD23BP54727 409 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 IFI35P80217 286 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PDIA2Q13087 525 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MEA1Q16626 185 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MDH1BQ5I0G3 518 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PLA2G4FQ68DD2 849 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 TRPM8Q7Z2W7 1104 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 HAUS6Q7Z4H7 955 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SESTD1Q86VW0 696 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 KIRREL3Q8IZU9 778 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 C4orf33Q8N1A6 199 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 C4orf32Q8N8J7 132 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 DHX38Q92620 1227 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 YIPF3Q9GZM5 350 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 AIPL1Q9NZN9 384 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 DDX20Q9UHI6 824 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PPP1R9AQ9ULJ8 1098 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SCAF8Q9UPN6 1271 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PLEKHG2Q9H7P9 1386 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 TLR3O15455 904 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 P4HA1P13674 534 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PRLRP16471 622 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 ELF1P32519 619 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 OR6B2Q6IFH4 312 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SULF1Q8IWU6 871 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SMC1BQ8NDV3 1235 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 HEXIM2Q96MH2 286 aaKnown RBP4.92□□□□□ -1.62
VPS13C-201ENST00000249837 PPP1R16BQ96T49 567 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 KIFC3Q9BVG8 833 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 VCXQ9H320 206 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 MSH4O15457 936 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 SERPINB6P35237 376 aa4.92□□□□□ -1.62
VPS13C-201ENST00000249837 EPHA7Q15375 998 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms