RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 USP20Q9Y2K6 914 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 TELO2Q9Y4R8 837 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 ALG6Q9Y672 507 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 FLT3P36888 993 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 PRPF4BQ13523 1007 aaKnown RBP21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 UAP1Q16222 522 aaPredicted RBP21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 POTEAQ6S8J7 498 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 MAP4K3Q8IVH8 894 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 FAM71AQ8IYT1 594 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 CCDC127Q96BQ5 260 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 CHORDC1Q9UHD1 332 aaPredicted RBP21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 RSPH14Q9UHP6 348 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 HACL1Q9UJ83 578 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 DIS3Q9Y2L1 958 aaKnown RBP21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 DENND3A2RUS2 1198 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 ZNF862O60290 1169 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 HSD17B3P37058 310 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 SKOR1P84550 965 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 SLC39A4Q6P5W5 647 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 MAATS1Q7Z4T9 603 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 ADAT2Q7Z6V5 191 aaKnown RBP21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 SRLQ86TD4 932 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 PPM1KQ8N3J5 372 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 CCDC26Q8TAB7 109 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 SEC14L1Q92503 715 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 ERVK-5Q9HDB9 667 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 TMOD4Q9NZQ9 345 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 CTTNBP2NLQ9P2B4 639 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 PCDHA10Q9Y5I2 948 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 PFASO15067 1338 aa21.09■□□□□ 0.97
CDC42EP1-201ENST00000249014 NFKBIEO00221 500 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 CYP26A1O43174 497 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 NR3C2P08235 984 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 COPB2P35606 906 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 SMTNP53814 917 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 BACE1P56817 501 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 GNGT1P63211 74 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 DMP1Q13316 513 aaPredicted RBP21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 AADACL2Q6P093 401 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 SLC47A2Q86VL8 602 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 MICALL2Q8IY33 904 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 SLC17A8Q8NDX2 589 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 PARD3BQ8TEW8 1205 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 ZKSCAN4Q969J2 545 aaPredicted RBP21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 GABBR1Q9UBS5 961 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 FZD1Q9UP38 647 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 EXOC7Q9UPT5 735 aa21.08■□□□□ 0.97
CDC42EP1-201ENST00000249014 UTRNP46939 3433 aa21.08■□□□□ 0.96
CDC42EP1-201ENST00000249014 PHIPQ8WWQ0 1821 aa21.08■□□□□ 0.96
CDC42EP1-201ENST00000249014 RGS20O76081 388 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 STBD1O95210 358 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 CCND2P30279 289 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 GPC5P78333 572 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 NLRX1Q86UT6 975 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 REPS2Q8NFH8 660 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 ELMO3Q96BJ8 720 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 TRIM51Q9BSJ1 452 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 KMT5AQ9NQR1 393 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 TOPORSQ9NS56 1045 aaPredicted RBP21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 RRP15Q9Y3B9 282 aaKnown RBP21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 ADGRA3Q8IWK6 1321 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 RTN2O75298 545 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 PTENP60484 403 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 TCEAL1Q15170 157 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 SHC3Q92529 594 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 KRT35Q92764 455 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 CEP170P1Q96L14 293 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 SENP7Q9BQF6 1050 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 PNMA2Q9UL42 364 aa21.07■□□□□ 0.96
CDC42EP1-201ENST00000249014 H0YGN5 161 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 EIF3HO15372 352 aaKnown RBP eCLIP21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 ATMINO43313 823 aaPredicted RBP21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 KCNA2P16389 499 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 MARCKSL1P49006 195 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 ATP1A2P50993 1020 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 SKIDA1Q1XH10 827 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 DALRD3Q5D0E6 543 aaKnown RBP21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 KRT39Q6A163 491 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 SNRNP48Q6IEG0 339 aaKnown RBP21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 C11orf63Q6NUN7 778 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 RDM1Q8NG50 284 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 HELQQ8TDG4 1101 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 GPRASP2Q96D09 838 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 NTPCRQ9BSD7 190 aaKnown RBP21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 NFS1Q9Y697 457 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 BRCA1P38398 1863 aaKnown RBP21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 MMEP08473 750 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 FDX1P10109 184 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 GMPSP49915 693 aaPredicted RBP21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 CEP85LQ5SZL2 805 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 XRRA1Q6P2D8 792 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 OR2W6PQ8NHA6 318 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 HVCN1Q96D96 273 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 DPH5Q9H2P9 285 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 COQ4Q9Y3A0 265 aa21.06■□□□□ 0.96
CDC42EP1-201ENST00000249014 TMEM110-MUSTN1A8MSY1 372 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 RPS12P25398 132 aaKnown RBP21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 FMO1Q01740 532 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 PDCLQ13371 301 aa21.05■□□□□ 0.96
CDC42EP1-201ENST00000249014 PRAMEF18Q5VWM3 479 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms