RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GRIK4Q16099 956 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 TRIM65Q6PJ69 517 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 TRPV1Q8NER1 839 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 TRIB2Q92519 343 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 KAT2BQ92831 832 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 NLRP4Q96MN2 994 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 NUCKS1Q9H1E3 243 aaKnown RBP16.56■□□□□ 0.24
HDHD3-201ENST00000238379 C2orf40Q9H1Z8 148 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 KIAA1586Q9HCI6 787 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 EPN1Q9Y6I3 576 aaPredicted RBP16.56■□□□□ 0.24
HDHD3-201ENST00000238379 EVPLQ92817 2033 aa16.56■□□□□ 0.24
HDHD3-201ENST00000238379 PMM2O15305 246 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 P4HA2O15460 535 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 NDUFA10O95299 355 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 TNNT1P13805 278 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 PTENP60484 403 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 POU5F1BQ06416 359 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 ENPEPQ07075 957 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 CYP24A1Q07973 514 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 MAPK6Q16659 721 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 LMO3Q8TAP4 145 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 FAM213AQ9BRX8 229 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 CFHR5Q9BXR6 569 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 NFKBIZQ9BYH8 718 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 AP5M1Q9H0R1 490 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 FZD8Q9H461 694 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 NHEJ1Q9H9Q4 299 aaPredicted RBP16.55■□□□□ 0.24
HDHD3-201ENST00000238379 ARHGAP20Q9P2F6 1191 aa16.55■□□□□ 0.24
HDHD3-201ENST00000238379 AGO2Q9UKV8 859 aaKnown RBP16.55■□□□□ 0.24
HDHD3-201ENST00000238379 ZNF233A6NK53 670 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 PRKCBP05771 671 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 CYBAP13498 195 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 AKR1A1P14550 325 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 GCLMP48507 274 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 CPT1AP50416 773 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 SP3Q02447 781 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 PRKCZQ05513 592 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 CCDC170Q8IYT3 715 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 CCDC127Q96BQ5 260 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 ZNF668Q96K58 619 aaPredicted RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 MRPL4Q9BYD3 311 aaKnown RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 IFT122Q9HBG6 1241 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 RRN3P2A6NIE6 340 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 LRRIQ3A6PVS8 624 aaPredicted RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 N4BP1O75113 896 aaKnown RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 PLEKP08567 350 aaPredicted RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 TMOD1P28289 359 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 MFSD14CQ5VZR4 134 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 HGSNATQ68CP4 663 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 CRELD2Q6UXH1 353 aaPredicted RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 EHBP1Q8NDI1 1231 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 ACRBPQ8NEB7 543 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 ACO2Q99798 780 aaKnown RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 TMEM117Q9H0C3 514 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 INTS2Q9H0H0 1204 aaKnown RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 SETD4Q9NVD3 440 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 AIPL1Q9NZN9 384 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 ANKFY1Q9P2R3 1169 aa16.54■□□□□ 0.24
HDHD3-201ENST00000238379 REXO2Q9Y3B8 237 aaKnown RBP16.54■□□□□ 0.24
HDHD3-201ENST00000238379 GOLGA6L9A6NEM1 432 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 HAS3O00219 553 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 ACKR2O00590 384 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 DUSP11O75319 330 aaKnown RBP16.53■□□□□ 0.24
HDHD3-201ENST00000238379 TOM1L1O75674 476 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 NLRP11P59045 1033 aaKnown RBP16.53■□□□□ 0.24
HDHD3-201ENST00000238379 BEX3Q00994 111 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 MBTD1Q05BQ5 628 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 KIAA0753Q2KHM9 967 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 EPC2Q52LR7 807 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 GJB7Q6PEY0 223 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 IFNLR1Q8IU57 520 aaPredicted RBP16.53■□□□□ 0.24
HDHD3-201ENST00000238379 ZNF784Q8NCA9 323 aaPredicted RBP16.53■□□□□ 0.24
HDHD3-201ENST00000238379 POP1Q99575 1024 aaKnown RBP16.53■□□□□ 0.24
HDHD3-201ENST00000238379 MSTO1Q9BUK6 570 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 MINDY3Q9H8M7 445 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 AJAP1Q9UKB5 411 aaPredicted RBP16.53■□□□□ 0.24
HDHD3-201ENST00000238379 MYO6Q9UM54 1294 aa16.53■□□□□ 0.24
HDHD3-201ENST00000238379 NRCAMQ92823 1304 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 INO80B-WBP1J3KQ70 363 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 ABLIM1O14639 778 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 CLDN3O15551 220 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 LDHAP00338 332 aaKnown RBP16.52■□□□□ 0.24
HDHD3-201ENST00000238379 SMIM10L2AP0DMW4 78 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 SMIM10L2BP0DMW5 78 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 CYLC1P35663 651 aaPredicted RBP16.52■□□□□ 0.24
HDHD3-201ENST00000238379 ACOT2P49753 483 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 MXI1P50539 228 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 JAM2P57087 298 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 CLDN10P78369 228 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 PSMD6Q15008 389 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 IQCEQ6IPM2 695 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 USP37Q86T82 979 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 KIAA0319LQ8IZA0 1049 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 LMBR1Q8WVP7 490 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
HDHD3-201ENST00000238379 AKT3Q9Y243 479 aa16.52■□□□□ 0.24
HDHD3-201ENST00000238379 A0A087WZ62 844 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms