RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 LENG1Q96BZ8 264 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 TYW1Q9NV66 732 aaKnown RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 ROBO3Q96MS0 1386 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 CARSP49589 748 aaKnown RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 RPUSD2Q8IZ73 545 aaKnown RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 CELF4Q9BZC1 486 aaKnown RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 TOPORSQ9NS56 1045 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 KLHL11Q9NVR0 708 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 TMEM51Q9NW97 253 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 BTBD7Q9P203 1132 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 MAGED2Q9UNF1 606 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 PIK3R2O00459 728 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 EPHB6O15197 1021 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 GAS8O95995 478 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 ITGB3BPQ13352 177 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 C7orf31Q8N865 590 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 GOLGA5Q8TBA6 731 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 DUSP9Q99956 384 aaKnown RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 C11orf70Q9BRQ4 267 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 ARHGAP20Q9P2F6 1191 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 TTC7AQ9ULT0 858 aaPredicted RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 STK38LQ9Y2H1 464 aa12.96□□□□□ -0.33
CHPF2-201ENST00000035307 BZW2Q9Y6E2 419 aaKnown RBP12.96□□□□□ -0.33
CHPF2-201ENST00000035307 CALCAP01258 141 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 CCDC38Q502W7 563 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 SGO2Q562F6 1265 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 CATSPERGQ6ZRH7 1159 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 FBF1Q8TES7 1133 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 AFG1LQ8WV93 481 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 TEPSINQ96N21 525 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 TACO1Q9BSH4 297 aaKnown RBP12.96□□□□□ -0.34
CHPF2-201ENST00000035307 TRIM51Q9BSJ1 452 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 AGO4Q9HCK5 861 aaKnown RBP12.96□□□□□ -0.34
CHPF2-201ENST00000035307 BAIAP2L1Q9UHR4 511 aa12.96□□□□□ -0.34
CHPF2-201ENST00000035307 GLTPD2A6NH11 291 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 CLDN3O15551 220 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 CYP26A1O43174 497 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 MRPS9P82933 396 aaKnown RBP12.95□□□□□ -0.34
CHPF2-201ENST00000035307 MXRA7P84157 204 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 CCDC60Q8IWA6 550 aaPredicted RBP12.95□□□□□ -0.34
CHPF2-201ENST00000035307 SYT2Q8N9I0 419 aaPredicted RBP12.95□□□□□ -0.34
CHPF2-201ENST00000035307 XXYLT1Q8NBI6 393 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 LRRC15Q8TF66 581 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 ANAPC7Q9UJX3 599 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 TELO2Q9Y4R8 837 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 UBR2Q8IWV8 1755 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 TRIM66O15016 1216 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 ADCYAP1R1P41586 468 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 MFAP3P55082 362 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 LACTBP83111 547 aaPredicted RBP12.95□□□□□ -0.34
CHPF2-201ENST00000035307 NEDD9Q14511 834 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 SYCP2LQ5T4T6 812 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 CCDC91Q7Z6B0 441 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 CBWD2Q8IUF1 395 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 HDAC7Q8WUI4 952 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 NSRP1Q9H0G5 558 aaKnown RBP12.95□□□□□ -0.34
CHPF2-201ENST00000035307 CYP39A1Q9NYL5 469 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 TNRC6CQ9HCJ0 1690 aaKnown RBP12.95□□□□□ -0.34
CHPF2-201ENST00000035307 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.95□□□□□ -0.34
CHPF2-201ENST00000035307 EVI5O60447 810 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 VTNP04004 478 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 CASC4Q6P4E1 433 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 SEPT1Q8WYJ6 367 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 EXOC4Q96A65 974 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 CEP63Q96MT8 703 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 IWS1Q96ST2 819 aa12.95□□□□□ -0.34
CHPF2-201ENST00000035307 INTS2Q9H0H0 1204 aaKnown RBP12.95□□□□□ -0.34
CHPF2-201ENST00000035307 COL22A1Q8NFW1 1626 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-201ENST00000035307 SASH3O75995 380 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 NR1D1P20393 614 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 ADORA2AP29274 412 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 GALCP54803 685 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 GUCY1A3Q02108 690 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 ORC1Q13415 861 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 ILDR2Q71H61 639 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 CATSPER4Q7RTX7 472 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 OR6J1Q8NGC5 347 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 SLC5A4Q9NY91 659 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 AKAP3O75969 853 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 ZNF280AP59817 542 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-201ENST00000035307 DR1Q01658 176 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 PSPC1Q8WXF1 523 aaKnown RBP12.94□□□□□ -0.34
CHPF2-201ENST00000035307 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-201ENST00000035307 ZBTB45Q96K62 511 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-201ENST00000035307 FMO2Q99518 471 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 ZNF446Q9NWS9 450 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 INPP5FQ9Y2H2 1132 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 SNCAIPQ9Y6H5 919 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 GOLGA8KD6RF30 607 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 H3BQF6 201 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 KCNJ1P48048 391 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 KCNJ6P48051 423 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 ZNF568Q3ZCX4 644 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 B4GALNT4Q76KP1 1039 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 GDAP1Q8TB36 358 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 C1orf54Q8WWF1 131 aa12.94□□□□□ -0.34
CHPF2-201ENST00000035307 SPC25Q9HBM1 224 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms