RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	PLSCR1	O15162	318 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	CYP26A1	O43174	497 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	MYZAP	P0CAP1	466 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	MESD	Q14696	234 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	KIF22	Q14807	665 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	TKFC	Q3LXA3	575 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	PHLDB2	Q86SQ0	1253 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	NOP9	Q86U38	636 aa	Known RBP	18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	LARGE2	Q8N3Y3	721 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	DHX38	Q92620	1227 aa	Known RBP	18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	WNK4	Q96J92	1243 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	TAAR1	Q96RJ0	339 aa		18.19	■□□□□ 0.5
PHGDH-223	ENST00000641597	KRT13	P13646	458 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	MDH1	P40925	334 aa	Known RBP	18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	PPP2R5A	Q15172	486 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	PTGIS	Q16647	500 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	NFIL3	Q16649	462 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	EPC2	Q52LR7	807 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	HAUS6	Q7Z4H7	955 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	PPM1K	Q8N3J5	372 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	BBX	Q8WY36	941 aa	Predicted RBP	18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	KREMEN1	Q96MU8	473 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	TMEM117	Q9H0C3	514 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	NOVA2	Q9UNW9	492 aa	Known RBP	18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	SMIM23	A6NLE4	172 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	CCDC188	H7C350	402 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	CHRNB2	P17787	502 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	SPDYE2	Q495Y8	402 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	GML	Q99445	158 aa		18.18	■□□□□ 0.5
PHGDH-223	ENST00000641597	ANKRD62	A6NC57	917 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597		E7EVH7	732 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	MME	P08473	750 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	ADSS	P30520	456 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	PLTP	P55058	493 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	DR1	Q01658	176 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	C2CD6	Q53TS8	623 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	TTC27	Q6P3X3	843 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	OGFOD1	Q8N543	542 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	MDM1	Q8TC05	714 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	AGO4	Q9HCK5	861 aa	Known RBP	18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	FZD1	Q9UP38	647 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	CCNE2	O96020	404 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	VCAM1	P19320	739 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	YWHAB	P31946	246 aa	Known RBP	18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	PTGER2	P43116	358 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	HSD17B4	P51659	736 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	SET	Q01105	290 aa	Predicted RBP	18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	SP4	Q02446	784 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	STXBP4	Q6ZWJ1	553 aa		18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	LARS	Q9P2J5	1176 aa	Known RBP	18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	UTP11	Q9Y3A2	253 aa	Known RBP	18.17	■□□□□ 0.5
PHGDH-223	ENST00000641597	ASTN2	O75129	1339 aa	Predicted RBP	18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	COMT	P21964	271 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	ANXA13	P27216	316 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	PTEN	P60484	403 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	MAGOH	P61326	146 aa	Known RBP	18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	MTMR1	Q13613	665 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	ODF2	Q5BJF6	829 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	FAM102B	Q5T8I3	360 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	FBXW10	Q5XX13	1052 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	LLGL2	Q6P1M3	1020 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	TADA2B	Q86TJ2	420 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	CCDC26	Q8TAB7	109 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	ZNF473	Q8WTR7	871 aa	Known RBP	18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	MAGOHB	Q96A72	148 aa	Known RBP	18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	CCT8L2	Q96SF2	557 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	RIT2	Q99578	217 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	EPN3	Q9H201	632 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	SLITRK6	Q9H5Y7	841 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	GOLGA6L10	A6NI86	522 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	HMGB1P1	B2RPK0	211 aa	Predicted RBP	18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	ICAM1	P05362	532 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	P4HB	P07237	508 aa	Known RBP	18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	KCNJ1	P48048	391 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	DAB2IP	Q5VWQ8	1189 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	MYCBPAP	Q8TBZ2	947 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	FBXO25	Q8TCJ0	367 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	EPS8L1	Q8TE68	723 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	PI4K2A	Q9BTU6	479 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	TSPYL1	Q9H0U9	437 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	EPB41L4B	Q9H329	900 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	PTPN22	Q9Y2R2	807 aa		18.16	■□□□□ 0.5
PHGDH-223	ENST00000641597	CCDC169	A6NNP5	214 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	PYGM	P11217	842 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	RPS6	P62753	249 aa	Known RBP	18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	QPCT	Q16769	361 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	KRT71	Q3SY84	523 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	NLRP14	Q86W24	1093 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	SLC9A9	Q8IVB4	645 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	PRELID2	Q8N945	189 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	XXYLT1	Q8NBI6	393 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	LRRC45	Q96CN5	670 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	FEM1B	Q9UK73	627 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	PLS3	P13797	630 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	QARS	P47897	775 aa	Known RBP	18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	INTS8	Q75QN2	995 aa	Known RBP	18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	JAML	Q86YT9	394 aa		18.15	■□□□□ 0.5
PHGDH-223	ENST00000641597	BSND	Q8WZ55	320 aa		18.15	■□□□□ 0.5

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