RNA–Protein interactions for RNA: ENST00000638230.1

HNRNPU-212, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-212ENST00000638230 RPA1P27694 616 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 COILP38432 576 aaPredicted RBP13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 STAT3P40763 770 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.292e-60■■□□□ 11.7
HNRNPU-212ENST00000638230 KIF22Q14807 665 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 TAF11Q15544 211 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 TTC27Q6P3X3 843 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 VSTM1Q6UX27 236 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 CCDC25Q86WR0 208 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 APLFQ8IW19 511 aaPredicted RBP13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 CCDC105Q8IYK2 499 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 C12orf50Q8NA57 414 aaPredicted RBP13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 BORCS6Q96GS4 357 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 MBOAT7Q96N66 472 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 WNT8AQ9H1J5 351 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 CDC42EP4Q9H3Q1 356 aaKnown RBP13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 WHRNQ9P202 907 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 COG5Q9UP83 839 aa13.22□□□□□ -0.29
HNRNPU-212ENST00000638230 GPR75-ASB3A0A0A6YYF3 556 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 A8MUI8 341 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 ABLIM1O14639 778 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 ZBTB5O15062 677 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 TBX3O15119 743 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 ECEL1O95672 775 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 POTEJP0CG39 1038 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 RRP1BQ14684 758 aaKnown RBP13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 LONRF1Q17RB8 773 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 GPATCH4Q5T3I0 446 aaKnown RBP13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 ARHGEF18Q6ZSZ5 1173 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 CATSPER3Q86XQ3 398 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 SPICE1Q8N0Z3 855 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 FITM2Q8N6M3 262 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 MAGEB18Q96M61 343 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 TGS1Q96RS0 853 aaKnown RBP13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 GPR88Q9GZN0 384 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 INTS2Q9H0H0 1204 aaKnown RBP13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 OLFML3Q9NRN5 406 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 APEX2Q9UBZ4 518 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 PNMA3Q9UL41 463 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 UBE4BO95155 1302 aa13.21□□□□□ -0.29
HNRNPU-212ENST00000638230 CLIC2O15247 247 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 UNC5CO95185 931 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 STX2P32856 288 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 MYL7Q01449 175 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 STRN3Q13033 797 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 PARP6Q2NL67 630 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 ZNF568Q3ZCX4 644 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 CMPK2Q5EBM0 449 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 PPP1R21Q6ZMI0 780 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 INTS8Q75QN2 995 aaKnown RBP13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 OTUD6AQ7L8S5 288 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 ANKRD42Q8N9B4 389 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 AGPAT1Q99943 283 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 OSBPL1AQ9BXW6 950 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 KIF9Q9HAQ2 790 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 KCNK9Q9NPC2 374 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 NKIRAS1Q9NYS0 192 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 ZFATQ9P243 1243 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 ADGRA3Q8IWK6 1321 aa13.21□□□□□ -0.3
HNRNPU-212ENST00000638230 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 AP3B2Q13367 1082 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 CTTNQ14247 550 aaKnown RBP13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 MTFR1Q15390 333 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 GRIK5Q16478 980 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 AP1ARQ63HQ0 302 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 AADACL2Q6P093 401 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 SLF2Q8IX21 1173 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 LMNTD2Q8IXW0 634 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 AGGF1Q8N302 714 aaeCLIP13.2□□□□□ -0.32e-6■■■□□ 17
HNRNPU-212ENST00000638230 KCTD17Q8N5Z5 321 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 KRT35Q92764 455 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 SLCO2A1Q92959 643 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 NAF1Q96HR8 494 aaKnown RBP13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 TAS2R14Q9NYV8 317 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 SLAIN2Q9P270 581 aa13.2□□□□□ -0.3
HNRNPU-212ENST00000638230 ZNF831Q5JPB2 1677 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 IGKV6D-41A0A0C4DH26 115 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 ANKRD63C9JTQ0 380 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 TCEA3O75764 348 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 MTA2O94776 668 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 ACSL3O95573 720 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 BCRP11274 1271 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 BRAFP15056 766 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 PEX19P40855 299 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 MARCKSL1P49006 195 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 GPC5P78333 572 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 CAV1Q03135 178 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 SPIRE1Q08AE8 756 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 MIGA2Q7L4E1 593 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 ETNPPLQ8TBG4 499 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 RMDN2Q96LZ7 410 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 LRMDAQ9H2I8 198 aa13.19□□□□□ -0.3
HNRNPU-212ENST00000638230 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms