RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PSPC1Q8WXF1 523 aaKnown RBP7.44□□□□□ -1.22
UPF3B-205ENST00000636792 HVCN1Q96D96 273 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 ABHD8Q96I13 439 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 GSDMAQ96QA5 445 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 C7orf25Q9BPX7 421 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 HTATIP2Q9BUP3 242 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
UPF3B-205ENST00000636792 TRIM9Q9C026 710 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 INO80BQ9C086 356 aaPredicted RBP7.44□□□□□ -1.22
UPF3B-205ENST00000636792 RNPEPQ9H4A4 650 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 GOLPH3LQ9H4A5 285 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 OLFML3Q9NRN5 406 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 RMND1Q9NWS8 449 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 COL4A3BPQ9Y5P4 624 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 UBE4BO95155 1302 aa7.44□□□□□ -1.22
UPF3B-205ENST00000636792 LTBP2Q14767 1821 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 DCDC2CA8MYV0 355 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 M0QZ92 97 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 SORBS3O60504 671 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 USO1O60763 962 aaKnown RBP7.43□□□□□ -1.22
UPF3B-205ENST00000636792 LETM1O95202 739 aaPredicted RBP7.43□□□□□ -1.22
UPF3B-205ENST00000636792 SMC2O95347 1197 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 CD4P01730 458 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 SMTNP53814 917 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 FOXK2Q01167 660 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 PSMD2Q13200 908 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 DMP1Q13316 513 aaPredicted RBP7.43□□□□□ -1.22
UPF3B-205ENST00000636792 BFSP2Q13515 415 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 HSP90AA2PQ14568 343 aaPredicted RBP7.43□□□□□ -1.22
UPF3B-205ENST00000636792 KCNB1Q14721 858 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 POSTNQ15063 836 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 COBLL1Q53SF7 1204 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 NT5DC1Q5TFE4 455 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 PLA2G4FQ68DD2 849 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 MTHFD1LQ6UB35 978 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 UNC13DQ70J99 1090 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 KCNK18Q7Z418 384 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 GPBP1Q86WP2 473 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 TNS4Q8IZW8 715 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 GPR161Q8N6U8 529 aaKnown RBP7.43□□□□□ -1.22
UPF3B-205ENST00000636792 USP38Q8NB14 1042 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 PIGOQ8TEQ8 1089 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 CHAMP1Q96JM3 812 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 IFT74Q96LB3 600 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 NUP62CLQ9H1M0 184 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 C2orf40Q9H1Z8 148 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 CLSTN2Q9H4D0 955 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 ST6GALNAC4Q9H4F1 302 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 PARVGQ9HBI0 331 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 DACT1Q9NYF0 836 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 HDAC6Q9UBN7 1215 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 SERTAD1Q9UHV2 236 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 NOD1Q9Y239 953 aa7.43□□□□□ -1.22
UPF3B-205ENST00000636792 TTLL8A6PVC2 850 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 EIF3DO15371 548 aaKnown RBP eCLIP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 GADD45BO75293 160 aaPredicted RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 RHOBTB3O94955 611 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 FAM13AO94988 1023 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 KRT18P05783 430 aaKnown RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 CYP2C9P11712 490 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 PLS3P13797 630 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 LIG1P18858 919 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 KLRC1P26715 233 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 RFC2P35250 354 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 IRS1P35568 1242 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 EFNA5P52803 228 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 NPEPPSP55786 919 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 MARSP56192 900 aaKnown RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 PSMC6P62333 389 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 PTSQ03393 145 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 EHHADHQ08426 723 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 DPYDQ12882 1025 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 MCM6Q14566 821 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 ZRSR1Q15695 479 aaKnown RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 PTGISQ16647 500 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 LONRF3Q496Y0 759 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 FAM47CQ5HY64 1035 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 CT47A1Q5JQC4 288 aaPredicted RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 FAM26DQ5JW98 314 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 MARCH8Q5T0T0 291 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 CCDC183Q5T5S1 534 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 COL13A1Q5TAT6 717 aaPredicted RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 ZNF385CQ66K41 422 aaPredicted RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 CDCA2Q69YH5 1023 aaPredicted RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 GDF6Q6KF10 455 aaPredicted RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 EFCAB12Q6NXP0 572 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 FOXR2Q6PJQ5 311 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 RBM43Q6ZSC3 357 aaKnown RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 NANOS1Q8WY41 292 aaKnown RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 RSPH1Q8WYR4 309 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 DNAJC19Q96DA6 116 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 PRIMPOLQ96LW4 560 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 UIMC1Q96RL1 719 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 REEP2Q9BRK0 252 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 NTPCRQ9BSD7 190 aaKnown RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 ANP32EQ9BTT0 268 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 SENP6Q9GZR1 1112 aaPredicted RBP7.42□□□□□ -1.22
UPF3B-205ENST00000636792 XPNPEP1Q9NQW7 623 aa7.42□□□□□ -1.22
UPF3B-205ENST00000636792 SETD4Q9NVD3 440 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms