RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 LRIT1Q9P2V4 623 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 IMPACTQ9P2X3 320 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 PPARGC1AQ9UBK2 798 aaKnown RBP-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 PRODH2Q9UF12 536 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 FKBPLQ9UIM3 349 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 ACSL6Q9UKU0 697 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF777Q9ULD5 760 aaPredicted RBP-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 SOX13Q9UN79 622 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 RPH3ALQ9UNE2 315 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF451Q9Y4E5 1061 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 PCDHB1Q9Y5F3 818 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 CSAG2Q9Y5P2 127 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 WNT6Q9Y6F9 365 aa-0.69□□□□□ -2.52
CDKL5-210ENST00000636046 PCNX2A6NKB5 2137 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 POLR2AP24928 1970 aaKnown RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 SCN5AQ14524 2016 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ACANP16112 2415 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 A0A0J9YWU9 116 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 A0A1W2PQ27 194 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 A0A1W2PQ64 194 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 A0A1W2PQC6 194 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 A0A1W2PQD8 194 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 A6NJY4 79 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 TMEM200CA6NKL6 621 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 FADS2P1A8MWK0 482 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 GRXCR1A8MXD5 290 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 GOLGA6L6A8MZA4 724 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 BTBD18B2RXH4 712 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 BMPR1BO00238 502 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 MATN2O00339 956 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 KIF1CO43896 1103 aaKnown RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 LMX1BO60663 402 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 GPR37L1O60883 481 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 PPP6R2O75170 966 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 SORBS2O94875 1100 aaKnown RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 KDM4BO94953 1096 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ECEL1O95672 775 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 IGLV3-19P01714 112 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 TUBB4AP04350 444 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF888P0CJ79 500 aaPredicted RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 GYPEP15421 78 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 CD40P25942 277 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ACVR2AP27037 513 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 TLX1P31314 330 aaPredicted RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 USP5P45974 858 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 CCR10P46092 362 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 KCNQ1P51787 676 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ART1P52961 327 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 DSCR9P59020 149 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 LYZP61626 148 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 MRPS35P82673 323 aaKnown RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 MRPS5P82675 430 aaKnown RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 IL9RQ01113 521 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 GUCY1B3Q02153 619 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 RUNX1T1Q06455 604 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 TNFRSF9Q07011 255 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ADAM9Q13443 819 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 FKBP5Q13451 457 aaPredicted RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 RAB33AQ14088 237 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 USP10Q14694 798 aaKnown RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 NOLC1Q14978 699 aaKnown RBP eCLIP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 MTFR1Q15390 333 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 SS18Q15532 418 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 HIF1AQ16665 826 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 PGS1Q32NB8 556 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 SNAI3Q3KNW1 292 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 AASDHQ4L235 1098 aaPredicted RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 C2orf83Q53S99 150 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 STPG1Q5TH74 334 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 C1orf53Q5VUE5 145 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 WBP2NLQ6ICG8 309 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 PRSS57Q6UWY2 283 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 MON1BQ7L1V2 547 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 AMIGO2Q86SJ2 522 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ZC3H18Q86VM9 953 aaKnown RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 REXO1L1PQ8IX06 675 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF440Q8IYI8 595 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 FAM26EQ8N5C1 309 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 NUDT10Q8NFP7 164 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 FGFBP3Q8TAT2 258 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ACTRT2Q8TDY3 377 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 TSC1Q92574 1164 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 COQ8BQ96D53 544 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 RTP4Q96DX8 246 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 TSPAN17Q96FV3 270 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 NUDT11Q96G61 164 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 PDLIM2Q96JY6 352 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 COX4I2Q96KJ9 171 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 B3GALT6Q96L58 329 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 CNOT6LQ96LI5 555 aaKnown RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ZSWIM3Q96MP5 696 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 CLIC6Q96NY7 704 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF300Q96RE9 604 aaPredicted RBP-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 CORO1BQ9BR76 489 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 GPR62Q9BZJ7 368 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 MYLK2Q9H1R3 596 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ABHD16BQ9H3Z7 469 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 PDZD7Q9H5P4 517 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF696Q9H7X3 374 aa-0.7□□□□□ -2.52
CDKL5-210ENST00000636046 MSL2Q9HCI7 577 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms