RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 FAM214AQ32MH5 1076 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 LSM12Q3MHD2 195 aaKnown RBP6.26□□□□□ -1.41
BRCA1-229ENST00000621897 PITRM1Q5JRX3 1037 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 C1QL3Q5VWW1 255 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 HDGFL2Q7Z4V5 671 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-229ENST00000621897 TMPRSS6Q8IU80 811 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 THEMISQ8N1K5 641 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-229ENST00000621897 ZNF512Q96ME7 567 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-229ENST00000621897 TTC1Q99614 292 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 SRRDQ9UH36 339 aa6.26□□□□□ -1.41
BRCA1-229ENST00000621897 CYP27B1O15528 508 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 CASRP41180 1078 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 NPEPPSP55786 919 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 KLF10Q13118 480 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 TAF7LQ5H9L4 462 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 MB21D1Q8N884 522 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 ARL8AQ96BM9 186 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 SLKQ9H2G2 1235 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-229ENST00000621897 KCTD10Q9H3F6 313 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 ZNF703Q9H7S9 590 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-229ENST00000621897 CAAP1Q9H8G2 361 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 ING1Q9UK53 422 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-229ENST00000621897 EDARQ9UNE0 448 aa6.25□□□□□ -1.41
BRCA1-229ENST00000621897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-229ENST00000621897 KLRG2A4D1S0 409 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-229ENST00000621897 NARSO43776 548 aaKnown RBP6.24□□□□□ -1.41
BRCA1-229ENST00000621897 ZEB2O60315 1214 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 ZNF202O95125 648 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 XPAP23025 273 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-229ENST00000621897 LGALS4P56470 323 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 FNDC7Q5VTL7 733 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 TAS1R1Q7RTX1 841 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 CMIPQ8IY22 773 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 AFAP1L2Q8N4X5 818 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 PGBD4Q96DM1 585 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 SORCS2Q96PQ0 1159 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 WNT8AQ9H1J5 351 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 VTA1Q9NP79 307 aa6.24□□□□□ -1.41
BRCA1-229ENST00000621897 AURKAIP1Q9NWT8 199 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-229ENST00000621897 APOBEC2Q9Y235 224 aaKnown RBP6.24□□□□□ -1.41
BRCA1-229ENST00000621897 CYR61O00622 381 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 NRP2O60462 931 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 TMEM127O75204 238 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 SOX5P35711 763 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 MAN2A2P49641 1150 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 SLC25A3Q00325 362 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 UBE3CQ15386 1083 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 CCDC178Q5BJE1 867 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 MFSD5Q6N075 450 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 LMBR1LQ6UX01 489 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 LHFPL2Q6ZUX7 228 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 GLB1L2Q8IW92 636 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 GSPT2Q8IYD1 628 aaKnown RBP6.23□□□□□ -1.41
BRCA1-229ENST00000621897 MDGA1Q8NFP4 955 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 OR14C36Q8NHC7 312 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 CHAC2Q8WUX2 184 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 ATXN2LQ8WWM7 1075 aaKnown RBP6.23□□□□□ -1.41
BRCA1-229ENST00000621897 EAF2Q96CJ1 260 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-229ENST00000621897 GPR87Q9BY21 358 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 PCED1AQ9H1Q7 454 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 KCNG1Q9UIX4 513 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 CDY2AQ9Y6F7 541 aa6.23□□□□□ -1.41
BRCA1-229ENST00000621897 NRP1O14786 923 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 HOXA3O43365 443 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-229ENST00000621897 ULK1O75385 1050 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 NRG3P56975 720 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 SESN3P58005 492 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 TUBA3CQ13748 450 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 CNGB1Q14028 1251 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-229ENST00000621897 TOB2Q14106 344 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-229ENST00000621897 TUBA3EQ6PEY2 450 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 OR5M3Q8NGP4 307 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 MNTQ99583 582 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 XDHP47989 1333 aa6.22□□□□□ -1.41
BRCA1-229ENST00000621897 MFAP3LO75121 409 aa6.21□□□□□ -1.42
BRCA1-229ENST00000621897 EYA4O95677 639 aa6.21□□□□□ -1.42
BRCA1-229ENST00000621897 STAT4Q14765 748 aa6.21□□□□□ -1.42
BRCA1-229ENST00000621897 ABHD15Q6UXT9 468 aa6.21□□□□□ -1.42
BRCA1-229ENST00000621897 HTR3DQ70Z44 454 aa6.21□□□□□ -1.42
BRCA1-229ENST00000621897 LILRA3Q8N6C8 439 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-229ENST00000621897 RSAD2Q8WXG1 361 aa6.21□□□□□ -1.42
BRCA1-229ENST00000621897 ST8SIA2Q92186 375 aa6.21□□□□□ -1.42
BRCA1-229ENST00000621897 FAM126AQ9BYI3 521 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-229ENST00000621897 PRAMEF4O60810 478 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 IGSF3O75054 1194 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 IPO13O94829 963 aaKnown RBP6.2□□□□□ -1.42
BRCA1-229ENST00000621897 LTA4HP09960 611 aaKnown RBP6.2□□□□□ -1.42
BRCA1-229ENST00000621897 GNAT2P19087 354 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 HK1P19367 917 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 ENPP1P22413 925 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 PTTG1IPP53801 180 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 TMPRSS15P98073 1019 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 DUSP2Q05923 314 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 FSCN1Q16658 493 aaKnown RBP6.2□□□□□ -1.42
BRCA1-229ENST00000621897 UGT8Q16880 541 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 USP51Q70EK9 711 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 APBB1IPQ7Z5R6 666 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-229ENST00000621897 TGFBRAP1Q8WUH2 860 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 IL17RAQ96F46 866 aa6.2□□□□□ -1.42
BRCA1-229ENST00000621897 LSM14BQ9BX40 385 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms