RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 UBE4BO95155 1302 aa14.88□□□□□ -0.03
CNOT3-210ENST00000618939 KLRC4O43908 158 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 SREBF1P36956 1147 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 CASP4P49662 377 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 BASP1P80723 227 aaKnown RBP14.87□□□□□ -0.03
CNOT3-210ENST00000618939 PPP2R5DQ14738 602 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 LRIG3Q6UXM1 1119 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 RBM41Q96IZ5 413 aaKnown RBP14.87□□□□□ -0.03
CNOT3-210ENST00000618939 ISCUQ9H1K1 167 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 SUCLA2Q9P2R7 463 aaPredicted RBP14.87□□□□□ -0.03
CNOT3-210ENST00000618939 MAD1L1Q9Y6D9 718 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 TOPAZ1Q8N9V7 1692 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 TRIM66O15016 1216 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 TJP3O95049 919 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 CA4P22748 312 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 E2F5Q15329 346 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 GPD1LQ8N335 351 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 FAM163AQ96GL9 167 aaPredicted RBP14.87□□□□□ -0.03
CNOT3-210ENST00000618939 INTUQ9ULD6 942 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 GRIK5Q16478 980 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 OR2W6PQ8NHA6 318 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 TPCN2Q8NHX9 752 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 FAM151AQ8WW52 585 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 C1orf54Q8WWF1 131 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
CNOT3-210ENST00000618939 MTMR8Q96EF0 704 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 ZDHHC15Q96MV8 337 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 EHD4Q9H223 541 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 SAYSD1Q9NPB0 183 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 AGPAT3Q9NRZ7 376 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 ZHX2Q9Y6X8 837 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 FGRP09769 529 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 PLS3P13797 630 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 SHMT1P34896 483 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 MSH2P43246 934 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 CAV1Q03135 178 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 STXBP2Q15833 593 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 BBS9Q3SYG4 887 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 CENPUQ71F23 418 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 TMEM139Q8IV31 216 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 EXOC8Q8IYI6 725 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 THNSL1Q8IYQ7 743 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 TNFRSF25Q93038 417 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 TIPINQ9BVW5 301 aa14.87□□□□□ -0.03
CNOT3-210ENST00000618939 SPATA31A6Q5VVP1 1343 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 WRNIP1Q96S55 665 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 MXRA8Q9BRK3 442 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 POLR3FQ9H1D9 316 aaPredicted RBP14.86□□□□□ -0.03
CNOT3-210ENST00000618939 EPN3Q9H201 632 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 EFCC1Q9HA90 598 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 FDX1P10109 184 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 MARK3P27448 753 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 TMEM119Q4V9L6 283 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 DALRD3Q5D0E6 543 aaKnown RBP14.86□□□□□ -0.03
CNOT3-210ENST00000618939 ZNF507Q8TCN5 953 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 NLRP4Q96MN2 994 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 ZNF70Q9UC06 446 aaPredicted RBP14.86□□□□□ -0.03
CNOT3-210ENST00000618939 AKAP3O75969 853 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 TRIM50Q86XT4 487 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 CELF4Q9BZC1 486 aaKnown RBP14.86□□□□□ -0.03
CNOT3-210ENST00000618939 ALG6Q9Y672 507 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 NALCNQ8IZF0 1738 aa14.86□□□□□ -0.03
CNOT3-210ENST00000618939 GNA15P30679 374 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 SNRNP35Q16560 246 aaKnown RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 KCNK18Q7Z418 384 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 SRRM1Q8IYB3 904 aaKnown RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 PDIK1LQ8N165 341 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 KCTD6Q8NC69 237 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 DCPSQ96C86 337 aaKnown RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 CHMP6Q96FZ7 201 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 UVRAGQ9P2Y5 699 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 AKT3Q9Y243 479 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 AFDNP55196 1824 aaKnown RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 DDTLA6NHG4 134 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 TLR3O15455 904 aaKnown RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 PHF2O75151 1096 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 SCP2P22307 547 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 LSP1P33241 339 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 BYSLQ13895 437 aaKnown RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 PAXIP1Q6ZW49 1069 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 RHOT1Q8IXI2 618 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 MTMR9Q96QG7 549 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 CCT8L2Q96SF2 557 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 MTRQ99707 1265 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 WDR46O15213 610 aaKnown RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 PSMA2P25787 234 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 LMBRD2Q68DH5 695 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 PYROXD1Q8WU10 500 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 CASKIN2Q8WXE0 1202 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 PPP1R12CQ9BZL4 782 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 FGFR4P22455 802 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 TBXAS1P24557 533 aaPredicted RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 SLC30A5Q8TAD4 765 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 ZWILCHQ9H900 591 aa14.85□□□□□ -0.03
CNOT3-210ENST00000618939 AGO2Q9UKV8 859 aaKnown RBP14.85□□□□□ -0.03
CNOT3-210ENST00000618939 A6NJR5 290 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 RASA4BC9J798 803 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 RASA4O43374 803 aa14.84□□□□□ -0.03
CNOT3-210ENST00000618939 MYBL1P10243 752 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms