RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 EIF2AK1Q9BQI3 630 aaKnown RBP24.21■■□□□ 1.47
CBWD1-223ENST00000613988 AGPAT5Q9NUQ2 364 aa24.21■■□□□ 1.47
CBWD1-223ENST00000613988 INPP5FQ9Y2H2 1132 aa24.21■■□□□ 1.47
CBWD1-223ENST00000613988 ZC3H11AO75152 810 aaKnown RBP eCLIP24.2■■□□□ 1.46
CBWD1-223ENST00000613988 PLA2G5P39877 138 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 TECP42680 631 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 KCNC3Q14003 757 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 SMC1AQ14683 1233 aaKnown RBP24.2■■□□□ 1.46
CBWD1-223ENST00000613988 NOMO2Q5JPE7 1267 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 TMEM169Q96HH4 297 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 MTRQ99707 1265 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 TTC12Q9H892 705 aaPredicted RBP24.2■■□□□ 1.46
CBWD1-223ENST00000613988 MINDY3Q9H8M7 445 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 MUTYHQ9UIF7 546 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 ARIH1Q9Y4X5 557 aaPredicted RBP24.2■■□□□ 1.46
CBWD1-223ENST00000613988 PCDHB2Q9Y5E7 798 aa24.2■■□□□ 1.46
CBWD1-223ENST00000613988 MEIS3P2A8K0S8 358 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 OFD1O75665 1012 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 PTMSP20962 102 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 MCM4P33991 863 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 CA8P35219 290 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 RNASELQ05823 741 aaKnown RBP24.19■■□□□ 1.46
CBWD1-223ENST00000613988 BMS1Q14692 1282 aaKnown RBP24.19■■□□□ 1.46
CBWD1-223ENST00000613988 FERMT3Q86UX7 667 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 MRPL43Q8N983 215 aaKnown RBP24.19■■□□□ 1.46
CBWD1-223ENST00000613988 RNF149Q8NC42 400 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 HSD17B14Q9BPX1 270 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 TBC1D13Q9NVG8 400 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 TRIOO75962 3097 aa24.19■■□□□ 1.46
CBWD1-223ENST00000613988 CARNS1A5YM72 827 aa24.18■■□□□ 1.46
CBWD1-223ENST00000613988 GOLGA6L22H0YM25 854 aa24.18■■□□□ 1.46
CBWD1-223ENST00000613988 NEMFO60524 1076 aa24.18■■□□□ 1.46
CBWD1-223ENST00000613988 TXKP42681 527 aa24.18■■□□□ 1.46
CBWD1-223ENST00000613988 ANKRD54Q6NXT1 300 aa24.18■■□□□ 1.46
CBWD1-223ENST00000613988 C8orf76Q96K31 380 aa24.18■■□□□ 1.46
CBWD1-223ENST00000613988 PHF7Q9BWX1 381 aaPredicted RBP24.18■■□□□ 1.46
CBWD1-223ENST00000613988 NRDE2Q9H7Z3 1164 aa24.18■■□□□ 1.46
CBWD1-223ENST00000613988 C2orf71A6NGG8 1288 aa24.17■■□□□ 1.46
CBWD1-223ENST00000613988 CXCL14O95715 111 aa24.17■■□□□ 1.46
CBWD1-223ENST00000613988 HERC4Q5GLZ8 1057 aaPredicted RBP24.17■■□□□ 1.46
CBWD1-223ENST00000613988 ZSCAN16Q9H4T2 348 aaPredicted RBP24.17■■□□□ 1.46
CBWD1-223ENST00000613988 ANKEF1Q9NU02 776 aa24.17■■□□□ 1.46
CBWD1-223ENST00000613988 LOC730098B7Z3J9 87 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 WNT7AO00755 349 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 LYPLA2O95372 231 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 HOXA11P31270 313 aaPredicted RBP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 MXD4Q14582 209 aaPredicted RBP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 SAFBQ15424 915 aaKnown RBP eCLIP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 FOXD4L5Q5VV16 416 aaPredicted RBP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 MRPL10Q7Z7H8 261 aaKnown RBP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 VPS52Q8N1B4 723 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 FBXO18Q8NFZ0 1043 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 URGCPQ8TCY9 931 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 FOXD4L4Q8WXT5 416 aaPredicted RBP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 SUSD6Q92537 303 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 RPGRIP1Q96KN7 1286 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 CCDC43Q96MW1 224 aaKnown RBP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 MTMR9Q96QG7 549 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 APOL5Q9BWW9 433 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 GBP3Q9H0R5 595 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 S1PR5Q9H228 398 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 XPNPEP1Q9NQW7 623 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 ARID2Q68CP9 1835 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 ERLIN2O94905 339 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 GALTP07902 379 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 HOXB8P17481 243 aaPredicted RBP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 ATP2B1P20020 1258 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 SYCE2Q6PIF2 218 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 AGMOQ6ZNB7 445 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 TMEM173Q86WV6 379 aaPredicted RBP24.16■■□□□ 1.46
CBWD1-223ENST00000613988 CASP10Q92851 521 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 IGSF21Q96ID5 467 aa24.16■■□□□ 1.46
CBWD1-223ENST00000613988 CLASP2O75122 1294 aaKnown RBP24.15■■□□□ 1.46
CBWD1-223ENST00000613988 DGAT1O75907 488 aa24.15■■□□□ 1.46
CBWD1-223ENST00000613988 GUCY1B3Q02153 619 aa24.15■■□□□ 1.46
CBWD1-223ENST00000613988 NCBP1Q09161 790 aaKnown RBP24.15■■□□□ 1.46
CBWD1-223ENST00000613988 TFDP1Q14186 410 aa24.15■■□□□ 1.46
CBWD1-223ENST00000613988 CBX2Q14781 532 aaPredicted RBP24.15■■□□□ 1.46
CBWD1-223ENST00000613988 UBXN11Q5T124 520 aa24.15■■□□□ 1.46
CBWD1-223ENST00000613988 DDX53Q86TM3 631 aaKnown RBP24.15■■□□□ 1.46
CBWD1-223ENST00000613988 TMEM87AQ8NBN3 555 aa24.15■■□□□ 1.46
CBWD1-223ENST00000613988 RSAD1Q9HA92 442 aa24.15■■□□□ 1.46
CBWD1-223ENST00000613988 DNAJB4Q9UDY4 337 aa24.15■■□□□ 1.46
CBWD1-223ENST00000613988 HCFC2Q9Y5Z7 792 aa24.15■■□□□ 1.46
CBWD1-223ENST00000613988 PTENP60484 403 aa24.14■■□□□ 1.45
CBWD1-223ENST00000613988 PCBP1Q15365 356 aaKnown RBP eCLIP24.14■■□□□ 1.45
CBWD1-223ENST00000613988 ZNF280BQ86YH2 543 aa24.14■■□□□ 1.45
CBWD1-223ENST00000613988 CNNM3Q8NE01 707 aa24.14■■□□□ 1.45
CBWD1-223ENST00000613988 FAM193BQ96PV7 902 aaPredicted RBP24.14■■□□□ 1.45
CBWD1-223ENST00000613988 ZBP1Q9H171 429 aa24.14■■□□□ 1.45
CBWD1-223ENST00000613988 KANSL3Q9P2N6 904 aa24.14■■□□□ 1.45
CBWD1-223ENST00000613988 CNTNAP2Q9UHC6 1331 aa24.14■■□□□ 1.45
CBWD1-223ENST00000613988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.13■■□□□ 1.45
CBWD1-223ENST00000613988 INO80B-WBP1J3KQ70 363 aa24.13■■□□□ 1.45
CBWD1-223ENST00000613988 AXLP30530 894 aa24.13■■□□□ 1.45
CBWD1-223ENST00000613988 MCM7P33993 719 aa24.13■■□□□ 1.45
CBWD1-223ENST00000613988 SLC11A1P49279 550 aa24.13■■□□□ 1.45
CBWD1-223ENST00000613988 POU5F1BQ06416 359 aa24.13■■□□□ 1.45
CBWD1-223ENST00000613988 TPRNQ4KMQ1 711 aa24.13■■□□□ 1.45
CBWD1-223ENST00000613988 PIGOQ8TEQ8 1089 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms