RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 LAMP2P13473 410 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SDHBP21912 280 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ATRXP46100 2492 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 AFF1P51825 1210 aaKnown RBP13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 FUT2Q10981 343 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 AAMPQ13685 434 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ST3GAL2Q16842 350 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SPATA31D4Q6ZUB0 917 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CATSPER4Q7RTX7 472 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZNF713Q8N859 430 aaPredicted RBP13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PGBD4Q96DM1 585 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 HERC2P3Q9BVR0 1158 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PIDD1Q9HB75 910 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 MYO10Q9HD67 2058 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 DISC1Q9NRI5 854 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CDV3Q9UKY7 258 aaKnown RBP13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PRG3Q9Y2Y8 225 aaPredicted RBP13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PCDHB2Q9Y5E7 798 aa13.26□□□□□ -0.29
PDLIM1P1-201ENST00000604187 NRP1O14786 923 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 LAMTOR5O43504 91 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZNF623O75123 536 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 POMCP01189 267 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GLUD2P49448 558 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 LMNB2Q03252 620 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZNF528Q3MIS6 628 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 KIAA0319Q5VV43 1072 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 APOA5Q6Q788 366 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 TAS1R1Q7RTX1 841 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SHDQ96IW2 340 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 FAM193BQ96PV7 902 aaPredicted RBP13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 BCO2Q9BYV7 579 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 MARCH5Q9NX47 278 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SEPT9Q9UHD8 586 aaPredicted RBP13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SMG5Q9UPR3 1016 aaKnown RBP13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 LOXHD1Q8IVV2 1947 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 DENND4AQ7Z401 1863 aa13.25□□□□□ -0.29
PDLIM1P1-201ENST00000604187 DCDC2BA2VCK2 349 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 TMEM150BA6NC51 233 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ADAMTS3O15072 1205 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ALDH2P05091 517 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 DNM2P50570 870 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 STARD6P59095 220 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GPC5P78333 572 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CDC42EP1Q00587 391 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CSTF1Q05048 431 aaKnown RBP13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SNW1Q13573 536 aaKnown RBP13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 TARBP2Q15633 366 aaKnown RBP13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RTN1Q16799 776 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 MTERF2Q49AM1 385 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 AGMOQ6ZNB7 445 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZNF410Q86VK4 478 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RHPN2Q8IUC4 686 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 REXO1Q8N1G1 1221 aaKnown RBP13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GPR161Q8N6U8 529 aaKnown RBP13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ATRIPQ8WXE1 791 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PHKBQ93100 1093 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 LENG9Q96B70 501 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 NLRP4Q96MN2 994 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SH2D3AQ9BRG2 576 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 NT5C3AQ9H0P0 336 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RSAD1Q9HA92 442 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 FBXO4Q9UKT5 387 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SSX2IPQ9Y2D8 614 aa13.24□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ANKRD11Q6UB99 2663 aaPredicted RBP13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 CNTNAP2Q9UHC6 1331 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 KANSL1LA0AUZ9 987 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PRR5-ARHGAP8B1AHC4 643 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SLC27A2O14975 620 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ARHGAP8P85298 464 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 UBXN2BQ14CS0 331 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PALB2Q86YC2 1186 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 KSR1Q8IVT5 923 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 SECISBP2LQ93073 1101 aaKnown RBP13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RPP25Q9BUL9 199 aaKnown RBP13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 RXFP1Q9HBX9 757 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 USP18Q9UMW8 372 aa13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 MTF2Q9Y483 593 aaPredicted RBP13.23□□□□□ -0.29
PDLIM1P1-201ENST00000604187 IGKV6-21A0A0C4DH24 114 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 F8W810 466 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 MSH4O15457 936 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 ZBTB43O43298 467 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 TGM5O43548 720 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 GAS7O60861 476 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 OR1G1P47890 313 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 JAK3P52333 1124 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 MLF2Q15773 248 aaPredicted RBP13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 PARM1Q6UWI2 310 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 MRPL10Q7Z7H8 261 aaKnown RBP13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
PDLIM1P1-201ENST00000604187 HDAC7Q8WUI4 952 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms