RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 CBWD1Q9BRT8 395 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 APOL6Q9BWW8 343 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 TEKT3Q9BXF9 490 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 SYNCQ9H7C4 482 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 TMBIM4Q9HC24 238 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 NXF1Q9UBU9 619 aaKnown RBP12.09□□□□□ -0.47
ZNF544-213ENST00000599227 PCDHA2Q9Y5H9 948 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 EMSYQ7Z589 1322 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 RGS16O15492 202 aaPredicted RBP12.09□□□□□ -0.47
ZNF544-213ENST00000599227 PIAS1O75925 651 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 CLTAP09496 248 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 RPA1P27694 616 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 FMO5P49326 533 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 DENND2CQ68D51 928 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 SYT2Q8N9I0 419 aaPredicted RBP12.09□□□□□ -0.47
ZNF544-213ENST00000599227 GDAP1Q8TB36 358 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 C1orf54Q8WWF1 131 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 RAPGEF5Q92565 580 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 FAM213AQ9BRX8 229 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 EDEM3Q9BZQ6 932 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 SWAP70Q9UH65 585 aa12.09□□□□□ -0.47
ZNF544-213ENST00000599227 PLCH1Q4KWH8 1693 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 SOX5P35711 763 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 PPP2R2AP63151 447 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 GABPAQ06546 454 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ITGB3BPQ13352 177 aaPredicted RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 SPRED3Q2MJR0 410 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 FRMD5Q7Z6J6 570 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ATG4CQ96DT6 458 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 INTS2Q9H0H0 1204 aaKnown RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ZNF70Q9UC06 446 aaPredicted RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ASIC3Q9UHC3 531 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 GOLGA8SH3BPF8 625 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 hCG_1984214I3L0E3 225 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 OPLAHO14841 1288 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 TGFB1I1O43294 461 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 MAP3K6O95382 1288 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 GJB6O95452 261 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 FERP16591 822 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ATF7P17544 494 aaPredicted RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 SLC29A2Q14542 456 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 NBPF12Q5TAG4 269 aaPredicted RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 SNRNP48Q6IEG0 339 aaKnown RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 NT5DC3Q86UY8 548 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 THNSL1Q8IYQ7 743 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 RPUSD2Q8IZ73 545 aaKnown RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 CCDC33Q8N5R6 958 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ZNF713Q8N859 430 aaPredicted RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ALG3Q92685 438 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 METTL14Q9HCE5 456 aaKnown RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ROBO3Q96MS0 1386 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 SYNJ2BP-COX16A0A087WUM0 186 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 PDXKO00764 312 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 CYP26A1O43174 497 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 EDRF1Q3B7T1 1238 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 KIAA1755Q5JYT7 1200 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 EPS8L3Q8TE67 593 aaKnown RBP12.08□□□□□ -0.48
ZNF544-213ENST00000599227 SEMA4AQ9H3S1 761 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 COX16Q9P0S2 106 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 GABBR1Q9UBS5 961 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 ALG6Q9Y672 507 aa12.08□□□□□ -0.48
ZNF544-213ENST00000599227 LRP5O75197 1615 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 MTMR1Q13613 665 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 CCDC13Q8IYE1 715 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 SYCE1Q8N0S2 351 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 PWWP2AQ96N64 755 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 KCNMB3Q9NPA1 279 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 DDX20Q9UHI6 824 aaKnown RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 TTC7AQ9ULT0 858 aaPredicted RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 BZW2Q9Y6E2 419 aaKnown RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 TCRBV7S2A1N4TA0A589 114 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 MMEP08473 750 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 CHN1P15882 459 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 ITIH3Q06033 890 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 MCTP2Q6DN12 878 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 HIBCHQ6NVY1 386 aaPredicted RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 CERKQ8TCT0 537 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 CRAMP1Q96RY5 1269 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 PLCD4Q9BRC7 762 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 LARSQ9P2J5 1176 aaKnown RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 F8VZ95 297 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 HSPA9P38646 679 aaKnown RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 SLC20A2Q08357 652 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 CUL1Q13616 776 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 LONRF1Q17RB8 773 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 GKAP1Q5VSY0 366 aaPredicted RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 KCNV1Q6PIU1 500 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 TBC1D1Q86TI0 1168 aaPredicted RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 ATG4AQ8WYN0 398 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 SYN2Q92777 582 aaPredicted RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 SEC16BQ96JE7 1060 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 NLRP4Q96MN2 994 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 PSMD1Q99460 953 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 SERPINA10Q9UK55 444 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 STK38LQ9Y2H1 464 aa12.07□□□□□ -0.48
ZNF544-213ENST00000599227 MRPL11Q9Y3B7 192 aaKnown RBP12.07□□□□□ -0.48
ZNF544-213ENST00000599227 IRS2Q9Y4H2 1338 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms