RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CCDC149Q6ZUS6 474 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 CCDC105Q8IYK2 499 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 SIX5Q8N196 739 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 RSAD2Q8WXG1 361 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 NLRP4Q96MN2 994 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 RNF26Q9BY78 433 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 C22orf23Q9BZE7 217 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 INO80BQ9C086 356 aaPredicted RBP18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 MINDY3Q9H8M7 445 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 DUSP12Q9UNI6 340 aa18.45■□□□□ 0.54
SHKBP1-215ENST00000597649 CARNS1A5YM72 827 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 EML1O00423 815 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 IFNAR1P17181 557 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 RAB27AP51159 221 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 NPEPPSP55786 919 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 ANAPC15P60006 121 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 ANGPT1Q15389 498 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 LETM2Q2VYF4 491 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 FBXL16Q8N461 479 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 DTWD2Q8NBA8 298 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 CCDC148Q8NFR7 591 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 ETNPPLQ8TBG4 499 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 PGBD4Q96DM1 585 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 MBOAT7Q96N66 472 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 EMILIN2Q9BXX0 1053 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 AGXT2Q9BYV1 514 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 AGPAT5Q9NUQ2 364 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 FAN1Q9Y2M0 1017 aa18.44■□□□□ 0.54
SHKBP1-215ENST00000597649 M0R2N6 131 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 NRP1O14786 923 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 POMCP01189 267 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 ALDH2P05091 517 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 MYBP10242 640 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 NLRP5P59047 1200 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 CCT2P78371 535 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 BLOC1S2Q6QNY1 142 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 C15orf39Q6ZRI6 1047 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 FBXL21Q9UKT6 434 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 DENND4AQ7Z401 1863 aa18.43■□□□□ 0.54
SHKBP1-215ENST00000597649 KRBA1A5PL33 1030 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 C2CD2LO14523 706 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 EFEMP2O95967 443 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 NPY5RQ15761 445 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 URGCPQ8TCY9 931 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 PRPF31Q8WWY3 499 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 TMEM143Q96AN5 459 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 RTP3Q9BQQ7 232 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 TMEM175Q9BSA9 504 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 RSAD1Q9HA92 442 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 MAN1C1Q9NR34 630 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 SH3GLB2Q9NR46 395 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 MRPL17Q9NRX2 175 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 MARCH5Q9NX47 278 aa18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 WRAP73Q9P2S5 460 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-215ENST00000597649 CCDC195A0A1B0GUA6 201 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 SPDYE4A6NLX3 237 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 TEX28O15482 410 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 SOD2P04179 222 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 SRGAP2CP0DJJ0 459 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 RPS6KB1P23443 525 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 ID4P47928 161 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 PSMC5P62195 406 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 POTEGQ6S5H5 508 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 SMG8Q8ND04 991 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 CMASQ8NFW8 434 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 RPS6KC1Q96S38 1066 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 MYADMQ96S97 322 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 RNF39Q9H2S5 420 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 IGSF9Q9P2J2 1179 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 PCDHA4Q9UN74 947 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 COL4A3BPQ9Y5P4 624 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 GPR179Q6PRD1 2367 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 C2orf16Q68DN1 1984 aa18.41■□□□□ 0.54
SHKBP1-215ENST00000597649 CEP250Q9BV73 2442 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 NCOR2Q9Y618 2525 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 F8W810 466 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 SLC37A4O43826 429 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 RFPL2O75678 378 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 CFHP08603 1231 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 AK2P54819 239 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 KIAA0319Q5VV43 1072 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 COLGALT2Q8IYK4 626 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 RNF168Q8IYW5 571 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 SLC44A3Q8N4M1 653 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 FAM193BQ96PV7 902 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 WDR6Q9NNW5 1121 aaKnown RBP18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 MIOSQ9NXC5 875 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 KANSL3Q9P2N6 904 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 WNT16Q9UBV4 365 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 STK39Q9UEW8 545 aa18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 PRG3Q9Y2Y8 225 aaPredicted RBP18.4■□□□□ 0.54
SHKBP1-215ENST00000597649 SPATA31D3P0C874 917 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 EVCP57679 992 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 SPATA31D4Q6ZUB0 917 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms