RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 UBE2OQ9C0C9 1292 aaKnown RBP16.46■□□□□ 0.23
DDX49-204ENST00000595858 ST6GALNAC4Q9H4F1 302 aa16.46■□□□□ 0.23
DDX49-204ENST00000595858 PHLPP2Q6ZVD8 1323 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 ABHD14A-ACY1A0A1B0GW23 586 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 ACKR2O00590 384 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 B4GALT5O43286 388 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 MGEA5O60502 916 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 TSPAN1O60635 241 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 SCP2P22307 547 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 GTF2BQ00403 316 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 RTN4RL1Q86UN2 441 aaPredicted RBP16.46■□□□□ 0.22
DDX49-204ENST00000595858 ERCC4Q92889 916 aaPredicted RBP16.46■□□□□ 0.22
DDX49-204ENST00000595858 CHST12Q9NRB3 414 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 AGPAT5Q9NUQ2 364 aa16.46■□□□□ 0.22
DDX49-204ENST00000595858 GOLGA6L3A6NEY3 463 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 TTLL13PA6NNM8 815 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 ENPP3O14638 875 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 ZSCAN20P17040 1043 aaPredicted RBP16.45■□□□□ 0.22
DDX49-204ENST00000595858 ARF4P18085 180 aaPredicted RBP16.45■□□□□ 0.22
DDX49-204ENST00000595858 AXLP30530 894 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 BMP8BP34820 402 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 NCBP1Q09161 790 aaKnown RBP16.45■□□□□ 0.22
DDX49-204ENST00000595858 DSC3Q14574 896 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 ZC2HC1CQ53FD0 456 aaPredicted RBP16.45■□□□□ 0.22
DDX49-204ENST00000595858 FAM26FQ5R3K3 315 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 SPATA20Q8TB22 786 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 HERVK_113Q902F9 699 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 ADAM2Q99965 735 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 STRA6Q9BX79 667 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 FGFBP2Q9BYJ0 223 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 EXOC1Q9NV70 894 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 PIN4Q9Y237 131 aaKnown RBP16.45■□□□□ 0.22
DDX49-204ENST00000595858 USP20Q9Y2K6 914 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 PCDHA5Q9Y5H7 936 aa16.45■□□□□ 0.22
DDX49-204ENST00000595858 PPP1R37O75864 691 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 BAIAP3O94812 1187 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 EDN1P05305 212 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 ABCD1P33897 745 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 CASP5P51878 434 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 STRN3Q13033 797 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 PRPF4BQ13523 1007 aaKnown RBP16.44■□□□□ 0.22
DDX49-204ENST00000595858 SHHQ15465 462 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 CAMK4Q16566 473 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 SKOR2Q2VWA4 1001 aaPredicted RBP16.44■□□□□ 0.22
DDX49-204ENST00000595858 C9orf50Q5SZB4 431 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 LINC01599Q8WXQ3 324 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 CPB2Q96IY4 423 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 TSPYL2Q9H2G4 693 aaPredicted RBP16.44■□□□□ 0.22
DDX49-204ENST00000595858 TBX20Q9UMR3 447 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.44■□□□□ 0.22
DDX49-204ENST00000595858 EFCAB14O75071 495 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 RHOBTB3O94955 611 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 SMC2O95347 1197 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 GCNT3O95395 438 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 MBD3O95983 291 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 MYBP10242 640 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 PSMD2Q13200 908 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 KCNB1Q14721 858 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 NT5DC1Q5TFE4 455 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 GLIS3Q8NEA6 775 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
DDX49-204ENST00000595858 GSDMAQ96QA5 445 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 CLSTN2Q9H4D0 955 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 SLC39A2Q9NP94 309 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 RGS18Q9NS28 235 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 PCDHB13Q9Y5F0 798 aa16.44■□□□□ 0.22
DDX49-204ENST00000595858 CNTNAP2Q9UHC6 1331 aa16.43■□□□□ 0.22
DDX49-204ENST00000595858 A0A1B0GUA9 196 aa16.43■□□□□ 0.22
DDX49-204ENST00000595858 SARSP49591 514 aaKnown RBP16.43■□□□□ 0.22
DDX49-204ENST00000595858 STK4Q13043 487 aa16.43■□□□□ 0.22
DDX49-204ENST00000595858 ALCAMQ13740 583 aa16.43■□□□□ 0.22
DDX49-204ENST00000595858 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
DDX49-204ENST00000595858 SMARCE1Q969G3 411 aa16.43■□□□□ 0.22
DDX49-204ENST00000595858 MRPL4Q9BYD3 311 aaKnown RBP16.43■□□□□ 0.22
DDX49-204ENST00000595858 CXXC1Q9P0U4 656 aaPredicted RBP16.43■□□□□ 0.22
DDX49-204ENST00000595858 ZBBXA8MT70 800 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 WDR5P61964 334 aaKnown RBP16.42■□□□□ 0.22
DDX49-204ENST00000595858 RASIP1Q5U651 963 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 TWF2Q6IBS0 349 aaKnown RBP16.42■□□□□ 0.22
DDX49-204ENST00000595858 NOTUMQ6P988 496 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDX49-204ENST00000595858 SLC24A5Q71RS6 500 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 EPM2AIP1Q7L775 607 aaPredicted RBP16.42■□□□□ 0.22
DDX49-204ENST00000595858 HVCN1Q96D96 273 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 ACO2Q99798 780 aaKnown RBP16.42■□□□□ 0.22
DDX49-204ENST00000595858 TARS2Q9BW92 718 aaKnown RBP16.42■□□□□ 0.22
DDX49-204ENST00000595858 MTIF3Q9H2K0 278 aaKnown RBP16.42■□□□□ 0.22
DDX49-204ENST00000595858 PRO3102Q9H379 93 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 C9IYK1 514 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 PRPF6O94906 941 aaKnown RBP16.42■□□□□ 0.22
DDX49-204ENST00000595858 KCNA1Q09470 495 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 TMEM132AQ24JP5 1023 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 ATF7IP2Q5U623 682 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 STXBP4Q6ZWJ1 553 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 CDR2LQ86X02 465 aaPredicted RBP16.42■□□□□ 0.22
DDX49-204ENST00000595858 MAP4K3Q8IVH8 894 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 CCDC51Q96ER9 411 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 TRAIPQ9BWF2 469 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 NUP62CLQ9H1M0 184 aa16.42■□□□□ 0.22
DDX49-204ENST00000595858 RTN4Q9NQC3 1192 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms