RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 LIG1P18858 919 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 SYKP43405 635 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 SARSP49591 514 aaKnown RBP23.23■■□□□ 1.31
CIRBP-229ENST00000590704 CUL4BQ13620 913 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 PCBP1Q15365 356 aaKnown RBP eCLIP23.23■■□□□ 1.31
CIRBP-229ENST00000590704 CDR2LQ86X02 465 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-229ENST00000590704 DEPTORQ8TB45 409 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 C2orf40Q9H1Z8 148 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 MTIF3Q9H2K0 278 aaKnown RBP23.23■■□□□ 1.31
CIRBP-229ENST00000590704 PARVGQ9HBI0 331 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 KMT5AQ9NQR1 393 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 LCHNA4D1U4 455 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 MEIS3P2A8K0S8 358 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 ACKR2O00590 384 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 ABLIM1O14639 778 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 KLRC4O43908 158 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 PPP1R37O75864 691 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 LINC00271P0C7V0 271 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 NMT1P30419 496 aaKnown RBP23.22■■□□□ 1.31
CIRBP-229ENST00000590704 FXR1P51114 621 aaKnown RBP eCLIP23.22■■□□□ 1.31
CIRBP-229ENST00000590704 DMP1Q13316 513 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-229ENST00000590704 SFR1Q86XK3 245 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 ECHDC2Q86YB7 292 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 MYCT1Q8N699 235 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 EIF2AQ9BY44 585 aaKnown RBP23.22■■□□□ 1.31
CIRBP-229ENST00000590704 BLZF1Q9H2G9 400 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 PTPRHQ9HD43 1115 aa23.22■■□□□ 1.31
CIRBP-229ENST00000590704 PIN4Q9Y237 131 aaKnown RBP23.22■■□□□ 1.31
CIRBP-229ENST00000590704 TRAK2O60296 914 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 ZNF623O75123 536 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 AMHP03971 560 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 PRKCBP05771 671 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 AFMP43652 599 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 KCNJ6P48051 423 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 EEF1DP3Q658K8 133 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 ZNF720Q7Z2F6 126 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 SPRED2Q7Z698 418 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 MRPL10Q7Z7H8 261 aaKnown RBP23.21■■□□□ 1.31
CIRBP-229ENST00000590704 SMG8Q8ND04 991 aaKnown RBP23.21■■□□□ 1.31
CIRBP-229ENST00000590704 GLIS3Q8NEA6 775 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 HPS3Q969F9 1004 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 PRIMPOLQ96LW4 560 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 MAGEF1Q9HAY2 307 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 C1orf112Q9NSG2 853 aa23.21■■□□□ 1.31
CIRBP-229ENST00000590704 PRMT7Q9NVM4 692 aaPredicted RBP23.21■■□□□ 1.31
CIRBP-229ENST00000590704 LARSQ9P2J5 1176 aaKnown RBP23.21■■□□□ 1.31
CIRBP-229ENST00000590704 K7ERI5 159 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 DGKIO75912 1065 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 FAM13AO94988 1023 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 UPP2O95045 317 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 PRR29P0C7W0 189 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 AXLP30530 894 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 GATMP50440 423 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 CASP5P51878 434 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 EFNA5P52803 228 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 GTF2BQ00403 316 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 FAM117BQ6P1L5 589 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 KRBA2Q6ZNG9 492 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 HAUS6Q7Z4H7 955 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 ZBTB8OSQ8IWT0 167 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 SP7Q8TDD2 431 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-229ENST00000590704 IKZF4Q9H2S9 585 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 ST6GALNAC4Q9H4F1 302 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 ELAC1Q9H777 363 aaKnown RBP23.2■■□□□ 1.3
CIRBP-229ENST00000590704 FAM105AQ9NUU6 356 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 CNTNAP2Q9UHC6 1331 aa23.2■■□□□ 1.3
CIRBP-229ENST00000590704 DENND3A2RUS2 1198 aa23.19■■□□□ 1.3
CIRBP-229ENST00000590704 NR1I2O75469 434 aa23.19■■□□□ 1.3
CIRBP-229ENST00000590704 ZSCAN20P17040 1043 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-229ENST00000590704 MAPK6Q16659 721 aa23.19■■□□□ 1.3
CIRBP-229ENST00000590704 ZC2HC1CQ53FD0 456 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-229ENST00000590704 ACO2Q99798 780 aaKnown RBP23.19■■□□□ 1.3
CIRBP-229ENST00000590704 HAPLN2Q9GZV7 340 aa23.19■■□□□ 1.3
CIRBP-229ENST00000590704 RNF39Q9H2S5 420 aa23.19■■□□□ 1.3
CIRBP-229ENST00000590704 PDZD7Q9H5P4 517 aa23.19■■□□□ 1.3
CIRBP-229ENST00000590704 USP25Q9UHP3 1055 aa23.19■■□□□ 1.3
CIRBP-229ENST00000590704 KRT18P05783 430 aaKnown RBP23.18■■□□□ 1.3
CIRBP-229ENST00000590704 PROZP22891 400 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 KCNA1Q09470 495 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 NPAS4Q8IUM7 802 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 RAD9AQ99638 391 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 PYM1Q9BRP8 204 aaKnown RBP23.18■■□□□ 1.3
CIRBP-229ENST00000590704 TARS2Q9BW92 718 aaKnown RBP23.18■■□□□ 1.3
CIRBP-229ENST00000590704 OLFML3Q9NRN5 406 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 PANK4Q9NVE7 773 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 TMEM161AQ9NX61 479 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 PCDHA11Q9Y5I1 949 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 PHLPP2Q6ZVD8 1323 aa23.18■■□□□ 1.3
CIRBP-229ENST00000590704 FNDC1Q4ZHG4 1894 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-229ENST00000590704 ERLIN2O94905 339 aa23.17■■□□□ 1.3
CIRBP-229ENST00000590704 COASYQ13057 564 aa23.17■■□□□ 1.3
CIRBP-229ENST00000590704 AGMOQ6ZNB7 445 aa23.17■■□□□ 1.3
CIRBP-229ENST00000590704 ZBTB45Q96K62 511 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-229ENST00000590704 ZHX3Q9H4I2 956 aa23.17■■□□□ 1.3
CIRBP-229ENST00000590704 TBC1D7Q9P0N9 293 aa23.17■■□□□ 1.3
CIRBP-229ENST00000590704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-229ENST00000590704 PRPF40AO75400 957 aaKnown RBP23.17■■□□□ 1.3
CIRBP-229ENST00000590704 FGFR1P11362 822 aa23.17■■□□□ 1.3
CIRBP-229ENST00000590704 IDEP14735 1019 aa23.17■■□□□ 1.3
CIRBP-229ENST00000590704 DNAJB2P25686 324 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms