RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 ACKR2O00590 384 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 B4GALT5O43286 388 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 RHOBTB3O94955 611 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 ABCD1P33897 745 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 CASP5P51878 434 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 EPHB4P54760 987 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 GTF2BQ00403 316 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 PRPF4BQ13523 1007 aaKnown RBP17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 ALCAMQ13740 583 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 NFKBIBQ15653 356 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 AMHR2Q16671 573 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 FAM187BQ17R55 369 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 TMEM132AQ24JP5 1023 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 TCTN1Q2MV58 587 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 STXBP4Q6ZWJ1 553 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 C16orf59Q7L2K0 433 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 GLIS3Q8NEA6 775 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 SPATA20Q8TB22 786 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 PRIMPOLQ96LW4 560 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 TMX1Q9H3N1 280 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 AGPAT5Q9NUQ2 364 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 TBX20Q9UMR3 447 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 PIN4Q9Y237 131 aaKnown RBP17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 PCDHB13Q9Y5F0 798 aa17.01■□□□□ 0.31
RPRD1A-208ENST00000589050 CNTNAP2Q9UHC6 1331 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 PPP1R37O75864 691 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 EDN1P05305 212 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 SARSP49591 514 aaKnown RBP17■□□□□ 0.31
RPRD1A-208ENST00000589050 STK4Q13043 487 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
RPRD1A-208ENST00000589050 KCNN1Q92952 543 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 HVCN1Q96D96 273 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 BICD1Q96G01 975 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 CPB2Q96IY4 423 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 STRA6Q9BX79 667 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 FTHL17Q9BXU8 183 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 MRPL4Q9BYD3 311 aaKnown RBP17■□□□□ 0.31
RPRD1A-208ENST00000589050 KIAA1468Q9P260 1216 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 MAN1B1Q9UKM7 699 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 USP20Q9Y2K6 914 aa17■□□□□ 0.31
RPRD1A-208ENST00000589050 TTLL13PA6NNM8 815 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 MGEA5O60502 916 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 FGBP02675 491 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 ACTN1P12814 892 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 ZSCAN20P17040 1043 aaPredicted RBP16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 ARF4P18085 180 aaPredicted RBP16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 AXLP30530 894 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 HOXA11P31270 313 aaPredicted RBP16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 IKBKEQ14164 716 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 KLHL40Q2TBA0 621 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 CCDC183Q5T5S1 534 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 NT5DC1Q5TFE4 455 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 NOTUMQ6P988 496 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 ZNF365Q70YC5 407 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 EPM2AIP1Q7L775 607 aaPredicted RBP16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 MAP4K3Q8IVH8 894 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 KIAA0895Q8NCT3 520 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 ACCSQ96QU6 501 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 ADAM2Q99965 735 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 CHST12Q9NRB3 414 aa16.99■□□□□ 0.31
RPRD1A-208ENST00000589050 BIN1O00499 593 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 EIF3DO15371 548 aaKnown RBP eCLIP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 KCNA1Q09470 495 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 DSC3Q14574 896 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 TMEM240Q5SV17 173 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 ATF7IP2Q5U623 682 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 ISM2Q6H9L7 571 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 TWF2Q6IBS0 349 aaKnown RBP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 CAVIN1Q6NZI2 390 aaKnown RBP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 FAM43BQ6ZT52 329 aaPredicted RBP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 OTOP2Q7RTS6 562 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 SYAP1Q96A49 352 aaPredicted RBP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 ACO2Q99798 780 aaKnown RBP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 TARS2Q9BW92 718 aaKnown RBP16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 EXOC7Q9UPT5 735 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 GDAQ9Y2T3 454 aa16.98■□□□□ 0.31
RPRD1A-208ENST00000589050 UBE4BO95155 1302 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 ABHD14A-ACY1A0A1B0GW23 586 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 HNRNPDLO14979 420 aaKnown RBP16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 N4BP3O15049 544 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 BAIAP3O94812 1187 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 LIG4P49917 911 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 ZNF658Q5TYW1 1059 aaPredicted RBP16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 CDR2LQ86X02 465 aaPredicted RBP16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 NELFCDQ8IXH7 590 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 SMYD4Q8IYR2 804 aaPredicted RBP16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 SYCP3Q8IZU3 236 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 ZNF507Q8TCN5 953 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 SCFD1Q8WVM8 642 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 LINC01599Q8WXQ3 324 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 GDF15Q99988 308 aa16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 GTPBP4Q9BZE4 634 aaKnown RBP16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 UBE2OQ9C0C9 1292 aaKnown RBP16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 TSPYL2Q9H2G4 693 aaPredicted RBP16.97■□□□□ 0.31
RPRD1A-208ENST00000589050 PDZD7Q9H5P4 517 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms