RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 EEF1GP26641 437 aaKnown RBP12.39□□□□□ -0.43
VMP1-207ENST00000588131 ABCD1P33897 745 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 PHKA2P46019 1235 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 CASP4P49662 377 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 CYP2J2P51589 502 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 EFNA5P52803 228 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 POU5F1BQ06416 359 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 SPAG1Q07617 926 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 STRN3Q13033 797 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 KRT31Q15323 416 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 KIZQ2M2Z5 673 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 FILIP1Q7Z7B0 1213 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
VMP1-207ENST00000588131 CREBRFQ8IUR6 639 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 C12orf56Q8IXR9 622 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 GOLGA5Q8TBA6 731 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 WNT8BQ93098 351 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 ARMC5Q96C12 935 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 BICD1Q96G01 975 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 GLT1D1Q96MS3 346 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 NAP1L5Q96NT1 182 aaPredicted RBP12.39□□□□□ -0.43
VMP1-207ENST00000588131 CBWD1Q9BRT8 395 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 NFKBIZQ9BYH8 718 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 TRIM5Q9C035 493 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
VMP1-207ENST00000588131 ADAMTS10Q9H324 1103 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 PCIF1Q9H4Z3 704 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 DMAC2Q9NW81 257 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 TAB2Q9NYJ8 693 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 OGDHLQ9ULD0 1010 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 HTTP42858 3142 aa12.39□□□□□ -0.43
VMP1-207ENST00000588131 INO80B-WBP1J3KQ70 363 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 HNRNPDLO14979 420 aaKnown RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 GPR32O75388 356 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 AKAP3O75969 853 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 FGFR1OPO95684 399 aaKnown RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 PRKCBP05771 671 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 IQCF3P0C7M6 154 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 ADSSP30520 456 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 COPB1P53618 953 aaKnown RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 PTPN11Q06124 597 aaPredicted RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 PKN2Q16513 984 aaKnown RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 MAPK6Q16659 721 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 ARMCX5Q6P1M9 558 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 SERINC5Q86VE9 423 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 ZNF410Q86VK4 478 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 FAM114A1Q8IWE2 563 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 ZSWIM2Q8NEG5 633 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 NLRP7Q8WX94 980 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 TARS2Q9BW92 718 aaKnown RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 INO80BQ9C086 356 aaPredicted RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 FZD8Q9H461 694 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 STARD7Q9NQZ5 370 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 INTS13Q9NVM9 706 aa12.38□□□□□ -0.43
VMP1-207ENST00000588131 CGNQ9P2M7 1197 aaKnown RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 MAGEC2Q9UBF1 373 aaPredicted RBP12.38□□□□□ -0.43
VMP1-207ENST00000588131 B4GALT5O43286 388 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 FGFR4P22455 802 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
VMP1-207ENST00000588131 LIG4P49917 911 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 UBASH3AP57075 661 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 SNRPFP62306 86 aaKnown RBP12.37□□□□□ -0.43
VMP1-207ENST00000588131 MYBPC2Q14324 1141 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 PTGISQ16647 500 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 AMHR2Q16671 573 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 PTPN21Q16825 1174 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 CCDC40Q4G0X9 1142 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 TAF2Q6P1X5 1199 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 SLC9A9Q8IVB4 645 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 SLC43A3Q8NBI5 491 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 TMEM174Q8WUU8 243 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 SAAL1Q96ER3 474 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 ZBTB45Q96K62 511 aaPredicted RBP12.37□□□□□ -0.43
VMP1-207ENST00000588131 SCLT1Q96NL6 688 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 OSMRQ99650 979 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 MRPL4Q9BYD3 311 aaKnown RBP12.37□□□□□ -0.43
VMP1-207ENST00000588131 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 VPS16Q9H269 839 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 TRMT13Q9NUP7 481 aaKnown RBP12.37□□□□□ -0.43
VMP1-207ENST00000588131 HSPBP1Q9NZL4 362 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 GINS2Q9Y248 185 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 STYXL1Q9Y6J8 313 aa12.37□□□□□ -0.43
VMP1-207ENST00000588131 A0A0U1RQG5 324 aaPredicted RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 A0A1B0GTH6 734 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 GOLGA8IPA6NC78 632 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 LRRC10BA6NIK2 292 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 GOLGA8JA6NMD2 632 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 ACKR2O00590 384 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 ABLIM1O14639 778 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 TEX33O43247 280 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 EXOC3O60645 756 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 SGPL1O95470 568 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms