RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MAPK6Q16659 721 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 FAM187BQ17R55 369 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 NT5DC1Q5TFE4 455 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 ISM2Q6H9L7 571 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 CNKSR3Q6P9H4 555 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 PPP4R3CPQ6ZMV5 832 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 OTOP2Q7RTS6 562 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 KIAA0895Q8NCT3 520 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 LINC01599Q8WXQ3 324 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 SEPT8Q92599 483 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 KCNN1Q92952 543 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 SMARCE1Q969G3 411 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 GDF15Q99988 308 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.521e-8■■■□□ 17.6
SMARCA4-213ENST00000587988 NUP62CLQ9H1M0 184 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 IKZF4Q9H2S9 585 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 ST6GALNAC4Q9H4F1 302 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 AGPAT5Q9NUQ2 364 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 EXOC1Q9NV70 894 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 PRMT7Q9NVM4 692 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 KCNG1Q9UIX4 513 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 HOOK1Q9UJC3 728 aaKnown RBP11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 MAN1B1Q9UKM7 699 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 TBX20Q9UMR3 447 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 PHLPP2Q6ZVD8 1323 aa11.78□□□□□ -0.52
SMARCA4-213ENST00000587988 ACKR2O00590 384 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 FGBP02675 491 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 HOXD13P35453 343 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 PRPF4BQ13523 1007 aaKnown RBP11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 KCNB1Q14721 858 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 C9orf50Q5SZB4 431 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 EPM2AIP1Q7L775 607 aaPredicted RBP11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 SLC17A8Q8NDX2 589 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 APBB2Q92870 758 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 PRIMPOLQ96LW4 560 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 ADAM2Q99965 735 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 TARS2Q9BW92 718 aaKnown RBP11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 TMEM63CQ9P1W3 806 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 PIN4Q9Y237 131 aaKnown RBP11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 GDAQ9Y2T3 454 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 MICAL3Q7RTP6 2002 aa11.77□□□□□ -0.53
SMARCA4-213ENST00000587988 A0A1B0GUA9 196 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 TISP43B9A030 160 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 H0YCG3 227 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 BIN1O00499 593 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 ENPP3O14638 875 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 TNRC18O15417 2968 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 SMC2O95347 1197 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 STRN3Q13033 797 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 PSMD2Q13200 908 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 IKBKEQ14164 716 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 PCBP1Q15365 356 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 L1TD1Q5T7N2 865 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 EEF1DP3Q658K8 133 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 MAP4K3Q8IVH8 894 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 SMYD4Q8IYR2 804 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 ZNF507Q8TCN5 953 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 SCFD1Q8WVM8 642 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 CCDC47Q96A33 483 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 ZBTB45Q96K62 511 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 GSDMAQ96QA5 445 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 ACO2Q99798 780 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 CXXC1Q9P0U4 656 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 PCDHB13Q9Y5F0 798 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 CNTNAP2Q9UHC6 1331 aa11.76□□□□□ -0.53
SMARCA4-213ENST00000587988 ABHD14A-ACY1A0A1B0GW23 586 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 ANKRD63C9JTQ0 380 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 ABLIM1O14639 778 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 EIF3DO15371 548 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 ZSCAN20P17040 1043 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 PTMSP20962 102 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 BMP6P22004 513 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 AXLP30530 894 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 DEFB103AP81534 67 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 ALCAMQ13740 583 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 MORC3Q14149 939 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 SHHQ15465 462 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 TMEM132AQ24JP5 1023 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 KLHL40Q2TBA0 621 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 UBXN11Q5T124 520 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 ATF7IP2Q5U623 682 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 TWF2Q6IBS0 349 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 SLC39A4Q6P5W5 647 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 PSRC1Q6PGN9 363 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 NELFCDQ8IXH7 590 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 HERVK_113Q902F9 699 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 HVCN1Q96D96 273 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 ACCSQ96QU6 501 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 FTHL17Q9BXU8 183 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 EIF2AQ9BY44 585 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 MRPL4Q9BYD3 311 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 UBE2OQ9C0C9 1292 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 HAPLN2Q9GZV7 340 aa11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-213ENST00000587988 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms