RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 RNF39Q9H2S5 420 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 NRDE2Q9H7Z3 1164 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 TLE6Q9H808 572 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 DDX19AQ9NUU7 478 aaKnown RBP22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 TBC1D13Q9NVG8 400 aa22.23■■□□□ 1.15
TRAPPC6A-203ENST00000587818 GRXCR2A6NFK2 248 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 E9PMD0 336 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 NCK2O43639 380 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 RBM10P98175 930 aaKnown RBP22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 RILPL1Q5EBL4 403 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 DTHD1Q6ZMT9 781 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ZNF280BQ86YH2 543 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 SLC39A11Q8N1S5 342 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 IGSF22Q8N9C0 903 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 MRPL9Q9BYD2 267 aaKnown RBP22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 BHMT2Q9H2M3 363 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 CD320Q9NPF0 282 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 PUF60Q9UHX1 559 aaKnown RBP22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 USP20Q9Y2K6 914 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 HES2Q9Y543 173 aa22.22■■□□□ 1.15
TRAPPC6A-203ENST00000587818 NCOR1O75376 2440 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 FSCN2O14926 492 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 B4GALT3O60512 393 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ZC3H11AO75152 810 aaKnown RBP eCLIP22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 TBX10O75333 385 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ARF4P18085 180 aaPredicted RBP22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ALDH7A1P49419 539 aaKnown RBP22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 KRT17Q04695 432 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 RNASELQ05823 741 aaKnown RBP22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 NCBP1Q09161 790 aaKnown RBP22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 ZRSR1Q15695 479 aaKnown RBP22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 HAUS3Q68CZ6 603 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 MCPH1Q8NEM0 835 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 APOL6Q9BWW8 343 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 DNAJB4Q9UDY4 337 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 IPPQ9Y573 584 aa22.21■■□□□ 1.15
TRAPPC6A-203ENST00000587818 DDHD2O94830 711 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 POMCP01189 267 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 ITGA4P13612 1032 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 LIG1P18858 919 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 NCLP19338 710 aaKnown RBP22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 AXLP30530 894 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 CUL4AQ13619 759 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 NOTUMQ6P988 496 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 TMC7Q7Z402 723 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 TMEM173Q86WV6 379 aaPredicted RBP22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 PPP2R3CQ969Q6 453 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 TCF25Q9BQ70 676 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 MMTAG2Q9BU76 263 aaKnown RBP22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 RAB34Q9BZG1 259 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 CSRNP2Q9H175 543 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 RSAD1Q9HA92 442 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 ENTPD7Q9NQZ7 604 aa22.2■■□□□ 1.14
TRAPPC6A-203ENST00000587818 TTLL13PA6NNM8 815 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 HIDE1A8MVS5 230 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 LAD1O00515 517 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 GALTP07902 379 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 MUTP22033 750 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 PRPHP41219 470 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 NDUFV1P49821 464 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 KRT79Q5XKE5 535 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 FAM178BQ8IXR5 827 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 EFHBQ8N7U6 833 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 PLIN2Q99541 437 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 FOXD4L1Q9NU39 408 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 MIOSQ9NXC5 875 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 CLEC1BQ9P126 229 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 LZTS1Q9Y250 596 aa22.19■■□□□ 1.14
TRAPPC6A-203ENST00000587818 NPTXRO95502 500 aa22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 PPM1AP35813 382 aa22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 SLC11A1P49279 550 aa22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 ATP2C1P98194 919 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 KCNK18Q7Z418 384 aa22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 URGCPQ8TCY9 931 aa22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 BCL7CQ8WUZ0 217 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 GAD1Q99259 594 aa22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 NFKBIZQ9BYH8 718 aa22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 BARX2Q9UMQ3 279 aaPredicted RBP22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 DNM3Q9UQ16 869 aa22.18■■□□□ 1.14
TRAPPC6A-203ENST00000587818 VWA3AA6NCI4 1184 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 GLP2RO95838 553 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 CA8P35219 290 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 PCBP1Q15365 356 aaKnown RBP eCLIP22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 DUSP6Q16828 381 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 PUS10Q3MIT2 529 aaKnown RBP22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 ZBTB8OSQ8IWT0 167 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 CNNM3Q8NE01 707 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 VN1R2Q8NFZ6 395 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 AUTS2Q8WXX7 1259 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 KHSRPQ92945 711 aaKnown RBP eCLIP22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 TMEM169Q96HH4 297 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 KIFC3Q9BVG8 833 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 FZD8Q9H461 694 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 CD207Q9UJ71 328 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 STK24Q9Y6E0 443 aa22.17■■□□□ 1.14
TRAPPC6A-203ENST00000587818 A0A1B0GUA9 196 aa22.16■■□□□ 1.14
TRAPPC6A-203ENST00000587818 VPS37CA5D8V6 355 aaPredicted RBP22.16■■□□□ 1.14
TRAPPC6A-203ENST00000587818 MBTPS2O43462 519 aa22.16■■□□□ 1.14
TRAPPC6A-203ENST00000587818 EYA4O95677 639 aa22.16■■□□□ 1.14
TRAPPC6A-203ENST00000587818 CXCL14O95715 111 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms